Evidence map›Paper›PMID 2395869›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1990

Characterization of a fibrillar collagen gene in sponges reveals the early evolutionary appearance of two collagen gene families.

J Y Exposito, R Garrone

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1990. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 142 citations in OpenAlex.

  1. Review
  2. Collagen from Marine Sources for Potential Application in Wound Treatment.Progress in molecular and subcellular biology · 2026
    Review
  3. Collagen Mechanics.Sub-cellular biochemistry · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. The fibrillar collagen family.International journal of molecular sciences · 2010
    Review
  14. Article
  15. Article
  16. A receptor tyrosine kinase from choanoflagellates: molecular insights into early animal evolution.Proceedings of the National Academy of Sciences of the United States of America · 2001
    Article
  17. Review
  18. Review
  19. Article
  20. Characterization of an intronless collagen gene family in the marine sponge Microciona prolifera.Proceedings of the National Academy of Sciences of the United States of America · 1993
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

J Y ExpositoInstitute of Biology and Chemistry of Proteins, Centre National de la Recherche Scientifique, Lyons, France.
R Garrone
Centre National pour la Recherche Scientifique et Technique (CNRST) · MA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have characterized cDNA and genomic clones coding for a sponge collagen. The partial cDNA has an open reading frame encoding 547 amino acid residues. The conceptual translation product contains a probably incomplete triple-helical domain (307 amino acids) with one Gly-Xaa-Yaa-Zaa imperfection in the otherwise perfect Gly-Xaa-Yaa repeats and a carboxyl propeptide (240 amino acids) that includes 7 cysteine residues. Amino acid sequence comparisons indicate that this sponge collagen is homologous to vertebrate and sea urchin fibrillar collagens. Partial characterization of the corresponding gene reveals an intron-exon organization clearly related to the fibrillar collagen gene family. The exons coding for the triple-helical domain are 54 base pairs (bp) or multiples thereof, except for a 57-bp exon containing the Gly-Xaa-Yaa-Zaa coding sequence and for two unusual exons of 126 and 18 bp, respectively. This latter 18-bp exon marks the end of the triple-helical domain, contrary to the other known fibrillar collagen genes that contain exons coding for the junction between the triple-helical domain and the carboxyl propeptide. Compared to other fibrillar collagen genes, the introns are remarkably small. Hybridization to blotted RNAs established that the gene transcript is 4.9 kilobases. Together with previous results that showed the existence of a nonfibrillar collagen in the same species, these data demonstrate that at least two collagen gene families are represented in the most primitive metazoa.

Indexed as

Biological EvolutionGenesMultigene FamilyAmino Acid SequenceAnimalsBase SequenceCloning, MolecularCollagenDNAHumansMolecular Sequence DataPoriferaRestriction MappingSequence Homology, Nucleic AcidCollagenDNA

Identifiers

PMID2395869
PMCPMC54598
OpenAlexW2000177426

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.