Evidence map›Paper›PMID 23957615›Full record

ArticleEnvironmental microbiology2014

The Legionella pneumophila kai operon is implicated in stress response and confers fitness in competitive environments.

Maria Loza-Correa, Tobias Sahr, Monica Rolando, Craig Daniels, Pierre Petit, Tania Skarina, Laura Gomez Valero, Delphine Dervins-Ravault, Nadine Honoré, Aleksey Savchenko and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Environmental microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Temperature-dependent fold-switching mechanism of the circadian clock protein KaiB.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. The conformational landscape of fold-switcher KaiB is tuned to the circadian rhythm timescale.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Photomorphogenesis of Myxococcus macrosporus: new insights for light-regulation of cell development.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. KidA, a multi-PAS domain protein, tunes the period of the cyanobacterial circadian oscillator.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Circadian rhythms in infectious diseases and symbiosis.Seminars in cell & developmental biology · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. Journal of bacteriology · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Circadian Rhythms in Cyanobacteria.Microbiology and molecular biology reviews : MMBR · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Maria Loza-CorreaInstitut Pasteur, Biologie des Bactéries Intracellulaires, Paris, France; CNRS UMR 3525, Paris, France.
Tobias Sahr
Monica Rolando
Craig Daniels
Pierre Petit
Tania Skarina
Laura Gomez Valero
Delphine Dervins-Ravault
Nadine Honoré
Aleksey Savchenko
Carmen Buchrieser
Institut Pasteur · FRUniversity of Toronto · CACentre National de la Recherche Scientifique · FR

Funding

The Midwest Center for Structural GenomicsU54GM074942 · NIGMS · UNIVERSITY OF CHICAGO · PI JOACHIMIAK, ANDRZEJ · 2005 to 2009
$51.0M
Midwest Center for Structural GenomicsU54GM094585 · NIGMS · UNIVERSITY OF CHICAGO · PI MINOR, WLADEK · 2010 to 2014
$33.7M
NIGMS NIH HHS GM074942NIGMS NIH HHS GM094585NIGMS NIH HHS U54 GM074942NIGMS NIH HHS U54 GM094585
6 · The paper itself

Abstract

Legionella pneumophila uses aquatic protozoa as replication niche and protection from harsh environments. Although L. pneumophila is not known to have a circadian clock, it encodes homologues of the KaiBC proteins of Cyanobacteria that regulate circadian gene expression. We show that L. pneumophila kaiB, kaiC and the downstream gene lpp1114, are transcribed as a unit under the control of the stress sigma factor RpoS. KaiC and KaiB of L. pneumophila do not interact as evidenced by yeast and bacterial two-hybrid analyses. Fusion of the C-terminal residues of cyanobacterial KaiB to Legionella KaiB restores their interaction. In contrast, KaiC of L. pneumophila conserved autophosphorylation activity, but KaiB does not trigger the dephosphorylation of KaiC like in Cyanobacteria. The crystal structure of L. pneumophila KaiB suggests that it is an oxidoreductase-like protein with a typical thioredoxin fold. Indeed, mutant analyses revealed that the kai operon-encoded proteins increase fitness of L. pneumophila in competitive environments, and confer higher resistance to oxidative and sodium stress. The phylogenetic analysis indicates that L. pneumophila KaiBC resemble Synechosystis KaiC2B2 and not circadian KaiB1C1. Thus, the L. pneumophila Kai proteins do not encode a circadian clock, but enhance stress resistance and adaption to changes in the environments.

Indexed as

OperonStress, PhysiologicalAcanthamoeba castellaniiAdaptation, PhysiologicalBacterial ProteinsCircadian ClocksCircadian Rhythm Signaling Peptides and ProteinsGene Expression ProfilingGene Expression Regulation, BacterialGenetic FitnessLegionella pneumophilaPhosphorylationPhylogenyProtein Structure, TertiaryRNA, BacterialBacterial ProteinsCircadian Rhythm Signaling Peptides and ProteinsKaiB protein, cyanobacteriaKaiC protein, cyanobacteriaRNA, Bacterial

Identifiers

PMID23957615
PMCPMC4113418
OpenAlexW1596776796

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.