Evidence map›Paper›PMID 23954399›Full record

ArticleMolecular immunology2013

The zinc finger transcription factor ZXDC activates CCL2 gene expression by opposing BCL6-mediated repression.

Jon E Ramsey, Joseph D Fontes

Abstract read
In one paragraph

Article in Molecular immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.2field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. iScience · 2023
    Article
  3. Article
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  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jon E RamseyDepartment of Biochemistry and Molecular Biology, University of Kansas School of Medicine, 3901 Rainbow Boulevard, MS3030, Kansas City, KS 66160, USA. Electronic address: jramsey@kumc.edu.
Joseph D Fontes
University of Kansas · US

Funding

UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ACKLEY, BRIAN DOUGLAS · 2001 to 2011
$38.1M
Research Design and Analysis Core (RDAC)P30HD002528 · NICHD · UNIVERSITY OF KANSAS LAWRENCE · PI FOWLER, STEPHEN CLETIUS · 1985 to 2015
$22.1M
The influence of the ZXDC protein on myelopoiesisR03AI092516 · NIAID · UNIVERSITY OF KANSAS MEDICAL CENTER · PI FONTES, JOSEPH D · 2011 to 2012
$150k
NCRR NIH HHS P20 RR016475NCRR NIH HHS RR016475NIAID NIH HHS AI092516NIAID NIH HHS R03 AI092516NICHD NIH HHS HD02528NICHD NIH HHS P30 HD002528
6 · The paper itself

Abstract

The zinc finger X-linked duplicated (ZXD) family of transcription factors has been implicated in regulating transcription of major histocompatibility complex class II genes in antigen presenting cells; roles beyond this function are not yet known. The expression of one gene in this family, ZXD family zinc finger C (ZXDC), is enriched in myeloid lineages and therefore we hypothesized that ZXDC may regulate myeloid-specific gene expression. Here we demonstrate that ZXDC regulates genes involved in myeloid cell differentiation and inflammation. Overexpression of the larger isoform of ZXDC, ZXDC1, activates expression of monocyte-specific markers of differentiation and synergizes with phorbol 12-myristate 13-acetate (which causes differentiation) in the human leukemic monoblast cell line U937. To identify additional gene targets of ZXDC1, we performed gene expression profiling which revealed multiple inflammatory gene clusters regulated by ZXDC1. Using a combination of approaches we show that ZXDC1 activates transcription of a gene within one of the regulated clusters, chemokine (C-C motif) ligand 2 (CCL2; monocyte chemoattractant protein 1; MCP1) via a previously defined distal regulatory element. Further, ZXDC1-dependent up-regulation of the gene involves eviction of the transcriptional repressor B-cell CLL/lymphoma 6 (BCL6), a factor known to be important in resolving inflammatory responses, from this region of the promoter. Collectively, our data show that ZXDC1 is a regulator in the process of myeloid function and that ZXDC1 is responsible for Ccl2 gene de-repression by BCL6.

Indexed as

Gene Expression ProfilingBase SequenceBlotting, WesternCell DifferentiationCell Line, TumorChemokine CCL2DNA-Binding ProteinsHEK293 CellsHumansMicroscopy, ConfocalMolecular Sequence DataOligonucleotide Array Sequence AnalysisPromoter Regions, GeneticProtein IsoformsProto-Oncogene Proteins c-bcl-6Reverse Transcriptase Polymerase Chain ReactionBCL6 protein, humanChemokine CCL2DNA-Binding ProteinsProtein IsoformsProto-Oncogene Proteins c-bcl-6Tetradecanoylphorbol AcetateTranscription FactorsZXDC protein, humanChemokineGene regulationInflammationZinc finger transcription factor

Identifiers

PMID23954399
PMCPMC3783546
OpenAlexW2121183090

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.