Evidence map›Paper›PMID 23954348›Full record

ArticleMolecular cell2013

Protons as second messenger regulators of G protein signaling.

Daniel G Isom, Vishwajith Sridharan, Rachael Baker, Sarah T Clement, David M Smalley, Henrik G Dohlman

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 90 citations in OpenAlex.

  1. Article
  2. Intracellular pH regulates ubiquitin-mediated degradation of the MAP kinase ERK3.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Review
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  14. Reactive Oxygen Species Behaving Badly: Oxidized Phosphatidylcholines Corrupt CaAmerican journal of respiratory cell and molecular biology · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Proton-gated coincidence detection is a common feature of GPCR signaling.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Daniel G IsomDepartment of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, NC 27599, USA. disom@unc.edu
Vishwajith Sridharan
Rachael Baker
Sarah T Clement
David M Smalley
Henrik G Dohlman
University of North Carolina at Chapel Hill · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
REGULATORS OF G PROTEIN SIGNALING IN YEASTR01GM059167 · NIGMS · YALE UNIVERSITY · PI DOHLMAN, HENRIK G. · 1999 to 2015
$3.7M
Modeling Feedback Regulation of Cell SignalingR01GM073180 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DOHLMAN, HENRIK G. · 2005 to 2012
$2.6M
NCI NIH HHS CA016086)NCI NIH HHS P30 CA016086NIGMS NIH HHS GM059167NIGMS NIH HHS GM073180NIGMS NIH HHS R01 GM059167NIGMS NIH HHS R01 GM073180
6 · The paper itself

Abstract

In response to environmental stress, cells often generate pH signals that serve to protect vital cellular components and reprogram gene expression for survival. A major barrier to our understanding of this process has been the identification of signaling proteins that detect changes in intracellular pH. To identify candidate pH sensors, we developed a computer algorithm that searches proteins for networks of proton-binding sidechains. This analysis indicates that Gα subunits, the principal transducers of G protein-coupled receptor (GPCR) signals, are pH sensors. Our structure-based calculations and biophysical investigations reveal that Gα subunits contain networks of pH-sensing sidechains buried between their Ras and helical domains. Further, we show that proton binding induces changes in conformation that promote Gα phosphorylation and suppress receptor-initiated signaling. Together, our computational, biophysical, and cellular analyses reveal an unexpected function for G proteins as mediators of stress-response signaling.

Indexed as

AlgorithmsProtonsSecond Messenger SystemsStress, PhysiologicalGTP-Binding Protein alpha SubunitsGuanosine 5'-O-(3-Thiotriphosphate)HumansHydrogen-Ion ConcentrationPhosphorylationProtein BindingProtein Structure, TertiaryReceptors, G-Protein-CoupledSignal TransductionTemperatureGTP-Binding Protein alpha SubunitsGuanosine 5'-O-(3-Thiotriphosphate)ProtonsReceptors, G-Protein-Coupled

Identifiers

PMID23954348
PMCPMC3770139
OpenAlexW2143760178

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.