Evidence map›Paper›PMID 23950998›Full record

ArticlePloS one2013

Diverse secreted effectors are required for Salmonella persistence in a mouse infection model.

Afshan S Kidwai, Ivy Mushamiri, George S Niemann, Roslyn N Brown, Joshua N Adkins, Fred Heffron

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. The Manipulation of Host Cells byInternational journal of molecular sciences · 2026
    Review
  2. Re-evaluating what makes a phage unsuitable for therapy.npj antimicrobials and resistance · 2025
    Review
  3. International journal of molecular sciences · 2025
    Review
  4. Functional Divergence of the ParalogInternational journal of molecular sciences · 2024
    Review
  5. Article
  6. Genotypic and phenotypic analysis ofFrontiers in microbiology · 2024
    Article
  7. Speaking the host language: howMicrobiology (Reading, England) · 2023
    Review
  8. The Attenuation Mechanism and Live Vaccine Potential of a Low-VirulenceJournal of microbiology and biotechnology · 2023
    Article
  9. The NEL Family of Bacterial E3 Ubiquitin Ligases.International journal of molecular sciences · 2022
    Review
  10. Review
  11. CRISPR/Cas9-Based Deletion of SpvB Gene FromFrontiers in bioengineering and biotechnology · 2022
    Article
  12. How the PhoP/PhoQ System Controls Virulence and MgMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  13. Canadian journal of veterinary research = Revue canadienne de recherche veterinaire · 2020
    Article
  14. Review
  15. Molecular & cellular proteomics : MCP · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. NleB/SseK effectors fromThe Journal of biological chemistry · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Afshan S KidwaiDepartment of Molecular Microbiology and Immunology, Oregon Health & Science University, Portland, Oregon, USA.
Ivy Mushamiri
George S Niemann
Roslyn N Brown
Joshua N Adkins
Fred Heffron

Funding

Consortia for High-Throughput-Enabled Structural Biology Partnerships (U01)U01GM094623 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI ADKINS, JOSHUA N. · 2010 to 2014
$5.2M
SALMONELLA GENES REQUIRED FOR SURVIVAL IN THE MACROPHAGER01AI022933 · NIAID · SCRIPPS RESEARCH INSTITUTE · PI HEFFRON, FRED L · 1987 to 2013
$4.6M
NIAID NIH HHS R01 AI 022933NIAID NIH HHS R01 AI022933NIGMS NIH HHS U01 GM 094623NIGMS NIH HHS U01 GM094623
6 · The paper itself

Abstract

Salmonella enterica serovar Typhimurium causes typhoid-like disease in mice and is a model of typhoid fever in humans. One of the hallmarks of typhoid is persistence, the ability of the bacteria to survive in the host weeks after infection. Virulence factors called effectors facilitate this process by direct transfer to the cytoplasm of infected cells thereby subverting cellular processes. Secretion of effectors to the cell cytoplasm takes place through multiple routes, including two separate type III secretion (T3SS) apparati as well as outer membrane vesicles. The two T3SS are encoded on separate pathogenicity islands, SPI-1 and -2, with SPI-1 more strongly associated with the intestinal phase of infection, and SPI-2 with the systemic phase. Both T3SS are required for persistence, but the effectors required have not been systematically evaluated. In this study, mutations in 48 described effectors were tested for persistence. We replaced each effector with a specific DNA barcode sequence by allelic exchange and co-infected with a wild-type reference to calculate the ratio of wild-type parent to mutant at different times after infection. The competitive index (CI) was determined by quantitative PCR in which primers that correspond to the barcode were used for amplification. Mutations in all but seven effectors reduced persistence demonstrating that most effectors were required. One exception was CigR, a recently discovered effector that is widely conserved throughout enteric bacteria. Deletion of cigR increased lethality, suggesting that it may be an anti-virulence factor. The fact that almost all Salmonella effectors are required for persistence argues against redundant functions. This is different from effector repertoires in other intracellular pathogens such as Legionella.

Indexed as

AnimalsBacterial ProteinsBacterial Secretion SystemsDisease Models, AnimalGenomic IslandsMiceProtein TransportSalmonella Infections, AnimalSalmonella typhimuriumVirulenceVirulence FactorsBacterial ProteinsBacterial Secretion SystemsVirulence Factors

Identifiers

PMID23950998
PMCPMC3741292

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.