Evidence map›Paper›PMID 23950939›Full record

ArticlePloS one2013

Structural guided scaffold phage display libraries as a source of bio-therapeutics.

Y K Stella Man, Danielle DiCara, Nicole Chan, Sandrine Vessillier, Stephen J Mather, Michelle L Rowe, Mark J Howard, John F Marshall, Ahuva Nissim

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. PET/CT Imaging of NSCLC with a αMolecular imaging and biology · 2019
    Article
  2. Article
  3. Article
  4. Molecular imaging of integrin αvβ6 expression in living subjects.American journal of nuclear medicine and molecular imaging · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Y K Stella ManCentre for Tumour Biology, Barts Cancer Institute, Queen Mary's University of London, London, United Kingdom.
Danielle DiCara
Nicole Chan
Sandrine Vessillier
Stephen J Mather
Michelle L Rowe
Mark J Howard
John F Marshall
Ahuva Nissim
Queen Mary University of London · GBUniversity of Kent · GBUniversity of London · GBWilliam Harvey Research Institute · GB

Funding

Wellcome TrustWellcome Trust 091163/Z/10/Z
6 · The paper itself

Abstract

We have developed a structurally-guided scaffold phage display strategy for identification of ligand mimetic bio-therapeutics. As a proof of concept we used the ligand of integrin αvβ6, a tumour cell surface receptor and a major new target for imaging and therapy of many types of solid cancer. NMR structure analysis showed that RGD-helix structures are optimal for αvβ6 ligand-interaction, so we designed novel algorithms to generate human single chain fragment variable (scFv) libraries with synthetic VH-CDR3 encoding RGD-helix hairpins with helices of differing pitch, length and amino acid composition. Study of the lead scFv clones D25scFv and D34scFv and their corresponding VH-CDR3 derived peptides, D25p and D34p, demonstrated: specific binding to recombinant and cellular αvβ6; inhibition of αvβ6-dependent cell and ligand adhesion, αvβ6-dependent cell internalisation; and selective retention by αvβ6-expressing, but not αvβ6-negative, human xenografts. NMR analysis established that both the D25p and D34p retained RGD-helix structures confirming the success of the algorithm. In conclusion, scFv libraries can be engineered based on ligand structural motifs to increase the likelihood of developing powerful bio-therapeutics.

Indexed as

Peptide LibraryAlgorithmsAmino Acid SequenceAnimalsAntigens, NeoplasmBinding SitesFemaleHumansIntegrinsLigandsMagnetic Resonance SpectroscopyMiceMice, NudeModels, MolecularMolecular Sequence DataOligopeptidesAntigens, Neoplasmarginyl-glycyl-aspartic acidintegrin alphavbeta6IntegrinsLigandsOligopeptidesPeptide LibrarySingle-Chain Antibodies

Identifiers

PMID23950939
PMCPMC3739823
OpenAlexW1965400339

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.