Evidence map›Paper›PMID 23945944›Full record

ArticleNucleic acids research2013

Baculoviral transduction facilitates TALEN-mediated targeted transgene integration and Cre/LoxP cassette exchange in human-induced pluripotent stem cells.

Haibao Zhu, Cia-Hin Lau, Sal-Lee Goh, Qingle Liang, Can Chen, Shouhui Du, Rui-Zhe Phang, Felix Chang Tay, Wee-Kiat Tan, Zhendong Li and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Article
  3. Gene-repaired iPS cells as novel approach for patient withFrontiers in bioengineering and biotechnology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. F1000Research · 2017
    Review
  13. Article
  14. Site-Specific Genome Engineering in Human Pluripotent Stem Cells.International journal of molecular sciences · 2016
    Review
  15. Article
  16. In Vivo Delivery Systems for Therapeutic Genome Editing.International journal of molecular sciences · 2016
    Review
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Haibao ZhuDepartment of Biological Sciences, National University of Singapore, 117543 Singapore, Department of Surgery, Program of Innovative Cancer Therapeutics, First Affiliated Hospital of Zhejiang University College of Medicine, 310009 Hangzhou, China and Institute of Bioengineering and Nanotechnology, 138669 Singapore.
Cia-Hin Lau
Sal-Lee Goh
Qingle Liang
Can Chen
Shouhui Du
Rui-Zhe Phang
Felix Chang Tay
Wee-Kiat Tan
Zhendong Li
Johan Chin-Kang Tay
Weimin Fan
Shu Wang
Zhejiang University · CNNational University of Singapore · SGInstitute of Bioengineering and Nanotechnology · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Safety and reliability of transgene integration in human genome continue to pose challenges for stem cell-based gene therapy. Here, we report a baculovirus-transcription activator-like effector nuclease system for AAVS1 locus-directed homologous recombination in human induced pluripotent stem cells (iPSCs). This viral system, when optimized in human U87 cells, provided a targeted integration efficiency of 95.21% in incorporating a Neo-eGFP cassette and was able to mediate integration of DNA insert up to 13.5 kb. In iPSCs, targeted integration with persistent transgene expression was achieved without compromising genomic stability. The modified iPSCs continued to express stem cell pluripotency markers and maintained the ability to differentiate into three germ lineages in derived embryoid bodies. Using a baculovirus-Cre/LoxP system in the iPSCs, the Neo-eGFP cassette at the AAVS1 locus could be replaced by a Hygro-mCherry cassette, demonstrating the feasibility of cassette exchange. Moreover, as assessed by measuring γ-H2AX expression levels, genome toxicity associated with chromosomal double-strand breaks was not detectable after transduction with moderate doses of baculoviral vectors expressing transcription activator-like effector nucleases. Given high targeted integration efficiency, flexibility in transgene exchange and low genome toxicity, our baculoviral transduction-based approach offers great potential and attractive option for precise genetic manipulation in human pluripotent stem cells.

Indexed as

Transduction, GeneticTransgenesBaculoviridaeCell Line, TumorDeoxyribonucleases, Type II Site-SpecificDNA-Binding ProteinsDNA End-Joining RepairGene TargetingGenetic VectorsHEK293 CellsHumansInduced Pluripotent Stem CellsIntegrasesMutationRecombinant Fusion ProteinsCre recombinaseDeoxyribonucleases, Type II Site-SpecificDNA-Binding Proteinsendodeoxyribonuclease FokIIntegrasesRecombinant Fusion Proteins

Identifiers

PMID23945944
PMCPMC3799456
OpenAlexW2132084309

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.