Evidence map›Paper›PMID 23944609›Full record

ArticleAnalytical chemistry2013

Absolute quantitation of immunoglobulin G and its glycoforms using multiple reaction monitoring.

Qiuting Hong, Carlito B Lebrilla, Suzanne Miyamoto, L Renee Ruhaak

Registry-linked trialAbstract read
In one paragraph

Article in Analytical chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03394092 (Changes in Glycopeptides of Serum Immunoglobulin G in Patients With Acute Myocardial Infarction and the Relationships Between Its Change and Prognosis), which is not on this map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03394092 completednot on this mapstarted 2018, after this paper: background citation

Changes in Glycopeptides of Serum Immunoglobulin G in Patients With Acute Myocardial Infarction and the Relationships Between Its Change and Prognosis

TypeobservationalSponsorThe First Affiliated Hospital of Dalian Medical UniversityRan2018 to 2019Enrolled100ConditionsAcute Coronary SyndromeArmsQuantitative measurements the changes of IgG glycosylation
3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

  1. Molecular & cellular proteomics : MCP · 2018
    Trial
  2. Trial
  3. Trial
  4. Article
  5. Review
  6. Review
  7. ACS omega · 2022
    Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Isomer-Specific Monitoring of SialylatedFrontiers in molecular biosciences · 2021
    Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. N-glycopeptide Signatures of IgAMolecular & cellular proteomics : MCP · 2019
    Article
  19. Article
  20. The Journal of experimental medicine · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Qiuting HongDepartment of Chemistry, University of California , One Shields Avenue, Davis, California, 95616, United States.
Carlito B Lebrilla
Suzanne Miyamoto
L Renee Ruhaak

Funding

The incorporation of human milk oligosaccharides in brain glycoconjugatesR01GM049077 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI LEBRILLA, CARLITO B · 1999 to 2024
$6.3M
Structures, Functions, & Genetic Diversity of Oligosaccharides in MilkR01HD061923 · NICHD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LEBRILLA, CARLITO B · 2009 to 2013
$1.6M
Serum biomarkers for early detection of H. pylori-associated gastric cancerR01CA136647 · NCI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SOLNICK, JAY V. · 2009 to 2013
$1.5M
NCI NIH HHS R01 CA136647NICHD NIH HHS R01 HD061923NICHD NIH HHS R01HD061923NIGMS NIH HHS R01 GM049077NIGMS NIH HHS R01GM049077
6 · The paper itself

Abstract

Studies aimed toward glycan biomarker discovery have focused on glycan characterization by the global profiling of released glycans. Site-specific glycosylation analysis is less developed but may provide new types of biomarkers with higher sensitivity and specificity. Quantitation of peptide-conjugated glycans directly facilitates the differential analysis of distinct glycoforms associated with specific proteins at distinct sites. We have developed a method using MRM to monitor protein glycosylation normalized to absolute protein concentrations to examine quantitative changes in glycosylation at a site-specific level. This new approach provides information regarding both the absolute amount of protein and the site-specific glycosylation profile and will thus be useful to determine if altered glycosylation profiles in serum/plasma are due to a change in protein glycosylation or a change in protein concentration. The remarkable sensitivity and selectivity of MRM enable the detection of low abundance IgG glycopeptides, even when IgG was digested directly in serum with no cleanup prior to the liquid chromatography. Our results show a low limit of detection of 60 amol and a wide dynamic range of 3 orders magnitude for IgG protein quantitation. The results show that IgG glycopeptides can be analyzed directly from serum (without enrichment) and yield more accurate abundances when normalized to the protein content. This report represents the most comprehensive study so far of the use of multiple reaction monitoring for the quantitation of glycoproteins and their glycosylation patterns in biofluids.

Indexed as

Amino Acid SequenceChromatography, High Pressure LiquidGlycosylationHumansImmunoglobulin GMolecular Sequence DataSpectrometry, Mass, Electrospray IonizationImmunoglobulin G

Identifiers

PMID23944609
PMCPMC3857154

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.