Evidence map›Paper›PMID 23943616›Full record

ArticleThe Journal of biological chemistry2013

Identification of biochemically distinct properties of the small ubiquitin-related modifier (SUMO) conjugation pathway in Plasmodium falciparum.

Katherine Reiter, Debaditya Mukhopadhyay, Hong Zhang, Lauren E Boucher, Nirbhay Kumar, Jürgen Bosch, Michael J Matunis

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Targeting SUMOylation inFrontiers in cellular and infection microbiology · 2021
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Katherine ReiterFrom the Departments of Biochemistry and Molecular Biology and.
Debaditya Mukhopadhyay
Hong Zhang
Lauren E Boucher
Nirbhay Kumar
Jürgen Bosch
Michael J Matunis

Funding

TRAINING IN AREAS FUNDAMENTAL TO CANCER RESEARCHT32CA009110 · NCI · JOHNS HOPKINS UNIVERSITY · PI MATUNIS, MICHAEL J., WEERARATNA, ASHANI T · 1985 to 2025
$13.1M
Regulation and Function of SUMO Protein Modification -Equipment SupplementR01GM060980 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI MATUNIS, MICHAEL J. · 2000 to 2023
$7.1M
The Chemistry-Biology Interface Program at Johns Hopkins UniversityT32GM080189 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI ROKITA, STEVEN E · 2008 to 2022
$3.5M
NCI NIH HHS T32 CA009110NIGMS NIH HHS GM060980NIGMS NIH HHS R01 GM060980NIGMS NIH HHS T32 GM080189
6 · The paper itself

Abstract

Small ubiquitin-related modifiers (SUMOs) are post-translationally conjugated to other proteins and are thereby essential regulators of a wide range of cellular processes. Sumoylation, and enzymes of the sumoylation pathway, are conserved in the malaria causing parasite, Plasmodium falciparum. However, the specific functions of sumoylation in P. falciparum, and the degree of functional conservation between enzymes of the human and P. falciparum sumoylation pathways, have not been characterized. Here, we demonstrate that sumoylation levels peak during midstages of the intra-erythrocyte developmental cycle, concomitant with hemoglobin consumption and elevated oxidative stress. In vitro studies revealed that P. falciparum E1- and E2-conjugating enzymes interact effectively to recognize and modify RanGAP1, a model mammalian SUMO substrate. However, in heterologous reactions, P. falciparum E1 and E2 enzymes failed to interact with cognate human E2 and E1 partners, respectively, to modify RanGAP1. Structural analysis, binding studies, and functional assays revealed divergent amino acid residues within the E1-E2 binding interface that define organism-specific enzyme interactions. Our studies identify sumoylation as a potentially important regulator of oxidative stress response during the P. falciparum intra-erythrocyte developmental cycle, and define E1 and E2 interactions as a promising target for development of parasite-specific inhibitors of sumoylation and parasite replication.

Indexed as

Amino Acid SequenceErythrocytesGene Expression RegulationGreen Fluorescent ProteinsHumansMicroscopy, FluorescenceMolecular ConformationMolecular Sequence DataOxidative StressPlasmodium falciparumProtein BindingProtein Processing, Post-TranslationalProtozoan ProteinsRecombinant ProteinsSequence Homology, Amino AcidSmall Ubiquitin-Related Modifier ProteinsGreen Fluorescent ProteinsProtozoan ProteinsRecombinant ProteinsSAE1 protein, humanSmall Ubiquitin-Related Modifier ProteinsUBA2 protein, humanUbiquitinUbiquitin-Activating EnzymesUbiquitin-Conjugating EnzymesUbiquitin-Conjugating Enzyme UBC9Crystal StructureMalariaPlasmodiumSumoSumoylationUbiquitin-conjugating Enzyme (Ubc)

Identifiers

PMID23943616
PMCPMC3784690

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.