Evidence map›Paper›PMID 23943155›Full record

ArticleJournal of clinical immunology2013

Combined de-novo mutation and non-random X-chromosome inactivation causing Wiskott-Aldrich syndrome in a female with thrombocytopenia.

Boonchai Boonyawat, Santhosh Dhanraj, Fahad Al Abbas, Bozana Zlateska, Eyal Grunenbaum, Chaim M Roifman, Leslie Steele, Stephen Meyn, Victor Blanchette, Stephen W Scherer and 6 more

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In one paragraph

Article in Journal of clinical immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Boonchai BoonyawatGenetics and Genome Biology Program, Research Institute, University of Toronto, Toronto, Ontario, Canada.
Santhosh Dhanraj
Fahad Al Abbas
Bozana Zlateska
Eyal Grunenbaum
Chaim M Roifman
Leslie Steele
Stephen Meyn
Victor Blanchette
Stephen W Scherer
Sabina Swierczek
Josef Prchal
Qili Zhu
Troy R Torgerson
Hans D Ochs
Yigal Dror
University of Toronto · CASeattle Children's Hospital · USUniversity of Utah · USHospital for Sick Children · CASickKids Foundation · CAUniversity of Washington · US

Funding

Canadian Institutes of Health Research 102528
6 · The paper itself

Abstract

objectiveDisorders linked to mutations in the X chromosomes typically affect males. The aim of the study is to decipher the mechanism of disease expression in a female patient with a heterozygous mutation on the X-chromosome. PATIENTS AND

methodsClinical data was extracted from the Canadian Inherited Marrow Failure Registry. Genomic ribonucleic acid (DNA) and complementary DNA (cDNA) underwent Sanger sequencing. Protein analysis was performed by flow cytometry. X-inactivation patterns were analyzed by evaluating the DNA methylation status and cDNA clonal expression of several genes on the X-chromosome. SNP array was used for molecular karyotyping of the X-chromosome.

resultsA female with thrombocytopenia, eczema and mild T-lymphocyte abnormalities with extensive negative diagnostic testing, was suspected to have Wiskott-Aldrich syndrome (WAS)/X-linked thrombocytopenia. Although the girl had a mutation (c.397G > A, p.E133K) in only one allele, she was found to have an extremely skewed X-inactivation pattern and no expression of the WAS protein. Family studies using DNA methylation analysis and cDNA clonal expression of several genes on the X-chromosome demonstrated that the patient developed de-novo non-random inactivation of the X-chromosome that does not carry the mutation. Genome-wide high-density molecular karyotyping excluded deletions and amplifications as a cause for the non-random inactivation of one X-chromosome.

conclusionsOur study emphasizes the need to test selected female patients with complete or incomplete disease expression for X-linked disorders even in the absence of a family history.

Indexed as

Antibody FormationDNA MethylationFemaleGenes, X-LinkedGenotypeHumansImmunityInfantInfant, NewbornMicroarray AnalysisMutationPedigreePolymorphism, Single NucleotideThrombocytopeniaT-LymphocytesWiskott-Aldrich SyndromeWiskott-Aldrich Syndrome Protein Family

Identifiers

PMID23943155
OpenAlexW2099343253

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.