Evidence map›Paper›PMID 23942954›Full record

ArticleArchives of virology2014

Genomic and evolutionary characterization of a novel influenza-C-like virus from swine.

Zizhang Sheng, Zhiguang Ran, Dan Wang, Adam D Hoppe, Randy Simonson, Suvobrata Chakravarty, Ben M Hause, Feng Li

Open access · greenAbstract read
In one paragraph

Article in Archives of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Influenza D virus.Current opinion in virology · 2020
    Review
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  15. Influenza D virus in cattle, France, 2011-2014.Emerging infectious diseases · 2015
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Zizhang ShengDepartment of Chemistry and Biochemistry, South Dakota State University, Brookings, SD, 57007, USA.
Zhiguang Ran
Dan Wang
Adam D Hoppe
Randy Simonson
Suvobrata Chakravarty
Ben M Hause
Feng Li
South Dakota State University · USWren Laboratories (United States) · USShandong Academy of Agricultural Sciences · CN

Funding

Mechanism of action of an HIV-1 maturation inhibitorK02AI076125 · NIAID · SOUTH DAKOTA STATE UNIVERSITY · PI LI, FENG · 2008 to 2012
$491k
Study of Novel Influenza C VirusR21AI107379 · NIAID · SOUTH DAKOTA STATE UNIVERSITY · PI LI, FENG · 2014 to 2015
$394k
NIAID NIH HHS K02 AI076125NIAID NIH HHS R21 AI107379
6 · The paper itself

Abstract

We recently described the isolation of a novel influenza virus from swine exhibiting respiratory disease in the United States that is distantly related to human influenza C virus. Based on genetic, biochemical and morphological analysis, the virus was provisionally classified as C/swine/Oklahoma/1334/2011 (C/OK). To further understand the genetics and evolution of this novel pathogen, we performed a comprehensive analysis of its sequence and phylogeny. The results demonstrated that C/OK and human influenza C viruses share a conserved array of predicted functional domains in the viral RNA genome replication and viral entry machinery but vary at key functional sites. Furthermore, our evolutionary analysis showed that homologous genes of C/OK and human influenza C viruses diverged from each other an estimated several hundred to several thousand years ago. Taken together, the findings described in this study support and extend our previous observations that C/OK is a genetically and evolutionarily distinct influenza virus in the family Orthomyxoviridae.

Indexed as

AnimalsCluster AnalysisEvolution, MolecularGammainfluenzavirusMolecular Sequence DataOklahomaOrthomyxoviridae InfectionsPhylogenyRNA, ViralSequence Analysis, DNASwineSwine DiseasesRNA, Viral

Identifiers

PMID23942954
PMCPMC5714291
OpenAlexW2075209344

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.