Evidence map›Paper›PMID 23940723›Full record

ArticlePloS one2013

Electron microscopic, genetic and protein expression analyses of Helicobacter acinonychis strains from a Bengal tiger.

Nicole Tegtmeyer, Francisco Rivas Traverso, Manfred Rohde, Omar A Oyarzabal, Norbert Lehn, Wulf Schneider-Brachert, Richard L Ferrero, James G Fox, Douglas E Berg, Steffen Backert

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 31 citations in OpenAlex.

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  6. Four Chromosomal Type IV Secretion Systems inFrontiers in microbiology · 2020
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  9. Unusual Manifestation of LiveInternational journal of molecular sciences · 2018
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  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Nicole TegtmeyerInstitute of Medical Microbiology, Otto von Guericke University Magdeburg, Magdeburg, Germany.
Francisco Rivas Traverso
Manfred Rohde
Omar A Oyarzabal
Norbert Lehn
Wulf Schneider-Brachert
Richard L Ferrero
James G Fox
Douglas E Berg
Steffen Backert
Otto-von-Guericke University Magdeburg · DEUniversity of Regensburg · DEHelmholtz Centre for Infection Research · DEMassachusetts Institute of Technology · USMonash Institute of Medical Research · AUWashington University in St. Louis · US

Funding

TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YAFFE, MICHAEL B · 1985 to 2020
$25.6M
NOVEL TRANSPOSONS AND PLASTICITY ZONES OF HELICOBACTER PYLORIR21AI088337 · NIAID · WASHINGTON UNIVERSITY · PI BERG, DOUGLAS EUGENE · 2010 to 2011
$416k
HELICOBACTER PYLORI GENOME SEQUENCE EVOLUTIONR21AI078237 · NIAID · WASHINGTON UNIVERSITY · PI BERG, DOUGLAS EUGENE · 2009 to 2010
$266k
Cancer Research UK C-796Medical Research CouncilNIAID NIH HHS R21 AI078237NIAID NIH HHS R21 AI088337NIEHS NIH HHS P30 ES002109
6 · The paper itself

Abstract

Colonization by Helicobacter species is commonly noted in many mammals. These infections often remain unrecognized, but can cause severe health complications or more subtle host immune perturbations. The aim of this study was to isolate and characterize putative novel Helicobacter spp. from Bengal tigers in Thailand. Morphological investigation (Gram-staining and electron microscopy) and genetic studies (16SrRNA, 23SrRNA, flagellin, urease and prophage gene analyses, RAPD DNA fingerprinting and restriction fragment polymorphisms) as well as Western blotting were used to characterize the isolated Helicobacters. Electron microscopy revealed spiral-shaped bacteria, which varied in length (2.5-6 µm) and contained up to four monopolar sheathed flagella. The 16SrRNA, 23SrRNA, sequencing and protein expression analyses identified novel H. acinonychis isolates closely related to H. pylori. These Asian isolates are genetically very similar to H. acinonychis strains of other big cats (cheetahs, lions, lion-tiger hybrid and other tigers) from North America and Europe, which is remarkable in the context of the great genetic diversity among worldwide H. pylori strains. We also found by immunoblotting that the Bengal tiger isolates express UreaseA/B, flagellin, BabA adhesin, neutrophil-activating protein NapA, HtrA protease, γ-glutamyl-transpeptidase GGT, Slt lytic transglycosylase and two DNA transfer relaxase orthologs that were known from H. pylori, but not the cag pathogenicity island, nor CagA, VacA, SabA, DupA or OipA proteins. These results give fresh insights into H. acinonychis genetics and the expression of potential pathogenicity-associated factors and their possible pathophysiological relevance in related gastric infections.

Indexed as

AnimalsBacterial ProteinsDNA FingerprintingGene Expression ProfilingGene Expression Regulation, BacterialGenes, BacterialHelicobacterHelicobacter InfectionsMicroscopy, ElectronRandom Amplified Polymorphic DNA TechniqueRNA, Ribosomal, 16SRNA, Ribosomal, 23STigersUreaseBacterial ProteinsRNA, Ribosomal, 16SRNA, Ribosomal, 23SUrease

Identifiers

PMID23940723
PMCPMC3733902
OpenAlexW2167774898

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.