Evidence map›Paper›PMID 23940569›Full record

ArticlePloS one2013

Arf induction by Tgfβ is influenced by Sp1 and C/ebpβ in opposing directions.

Yanbin Zheng, Caitlin Devitt, Jing Liu, Nida Iqbal, Stephen X Skapek

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Methyltransferase Inhibition Enables TgfMolecular and cellular biology · 2023
    Article
  2. Article
  3. Identification ofMolecular cancer research : MCR · 2019
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Aberrant Expression of p14Tumor & microenvironment
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yanbin ZhengDivision of Hematology-Oncology, Department of Pediatrics, The University of Texas Southwestern Medical Center, Dallas, Texas, USA. Yanbin.Zheng@UTSouthwestern.edu
Caitlin Devitt
Jing Liu
Nida Iqbal
Stephen X Skapek
The University of Texas Southwestern Medical Center · US

Funding

ARF Controls Vascular Regression During Eye DevelopmentR01EY014368 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI SKAPEK, STEPHEN X · 2003 to 2012
$3.4M
Tgf Beta 2 controls p19Arf During Eye DevelopmentR01EY019942 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI SKAPEK, STEPHEN X · 2010 to 2017
$2.6M
NEI NIH HHS EY 014368NEI NIH HHS EY 019942NEI NIH HHS R01 EY014368NEI NIH HHS R01 EY019942
6 · The paper itself

Abstract

Recent studies show that Arf, a bona fide tumor suppressor, also plays an essential role during mouse eye development. Tgfβ is required for Arf promoter activation in developing mouse eyes, and its capacity to induce Arf depends on Smads 2/3 as well as p38 Mapk. Substantial delay between activation of these pathways and increased Arf transcription imply that changes in the binding of additional transcription factors help orchestrate changes in Arf expression. Focusing on proteins with putative DNA binding elements near the mouse Arf transcription start, we now show that Tgfβ induction of this gene correlated with decreased expression and DNA binding of C/ebpβ to the proximal Arf promoter. Ectopic expression of C/ebpβ in mouse embryo fibroblasts (MEFs) blocked Arf induction by Tgfβ. Although basal levels of Arf mRNA were increased by C/ebpβ loss in MEFs and in the developing eye, Tgfβ was still able to increase Arf, indicating that derepression was not the sole factor. Chromatin immunoprecipitation (ChIP) assay showed increased Sp1 binding to the Arf promotor at 24 and 48 hours after Tgfβ treatment, at which time points Arf expression was significantly induced by Tgfβ. Chemical inhibition of Sp1 and its knockdown by RNA interference blocked Arf induction by Tgfβ in MEFs. In summary, our results indicate that C/ebpβ and Sp1 are negative and positive Arf regulators that are influenced by Tgfβ.

Indexed as

ADP-Ribosylation FactorsAnimalsBlotting, WesternCCAAT-Enhancer-Binding Protein-betaChromatin ImmunoprecipitationLaser Capture MicrodissectionMiceMice, Mutant StrainsPromoter Regions, GeneticReverse Transcriptase Polymerase Chain ReactionRNA, MessengerRNA, Small InterferingSp1 Transcription FactorTransforming Growth Factor betaADP-Ribosylation FactorsCCAAT-Enhancer-Binding Protein-betaRNA, MessengerRNA, Small InterferingSp1 Transcription FactorTransforming Growth Factor beta

Identifiers

PMID23940569
PMCPMC3734170
OpenAlexW1972869526

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.