Evidence map›Paper›PMID 23940280›Full record

ArticleBlood2013

Clonal genetic and hematopoietic heterogeneity among human-induced pluripotent stem cell lines.

Jason A Mills, Kai Wang, Prasuna Paluru, Lei Ying, Lin Lu, Aline M Galvão, Dongbin Xu, Yu Yao, Spencer K Sullivan, Lisa M Sullivan and 11 more

Abstract read
In one paragraph

Article in Blood, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 78 citations in OpenAlex.

  1. Induced Pluripotent Stem Cells derived CD71International journal of stem cells · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Differentiation of diabetic foot ulcer-derived induced pluripotent stem cells reveals distinct cellular and tissue phenotypes.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  12. Article
  13. Article
  14. Review
  15. NIPBLScientific reports · 2018
    Article
  16. Modeling of Autism Using Organoid Technology.Molecular neurobiology · 2017
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 1 country.

Jason A MillsDepartment of Pathology and Laboratory Medicine, The Children's Hospital of Philadelphia, Philadelphia, PA;
Kai Wang
Prasuna Paluru
Lei Ying
Lin Lu
Aline M Galvão
Dongbin Xu
Yu Yao
Spencer K Sullivan
Lisa M Sullivan
Helen Mac
Amel Omari
Jyh-Chang Jean
Steve Shen
Adam Gower
Avi Spira
Gustavo Mostoslavsky
Darrell N Kotton
Deborah L French
Mitchell J Weiss
Paul Gadue
Children's Hospital of Philadelphia · USCenter for Neuroscience and Regenerative Medicine · USBoston University · USBoston Medical Center · USUniversity of Southern California · US

Funding

Embryonic Stem Cell-Derived Platelets as Cellular TherapeuticsU01HL099656 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI PONCZ, MORTIMER · 2009 to 2015
$8.6M
Research BaseP30DK090969 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI WEISS, MITCHELL J · 2010 to 2015
$5.7M
Mentored career development in clinical research in non-malignant hematologyK12HL087064 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI ABRAMS, CHARLES S. · 2006 to 2016
$3.9M
Characterization of human hematopoietic and endodermal progenitors derived from iRC2HL101535 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI KOTTON, DARRELL N., MOSTOSLAVSKY, GUSTAVO · 2009 to 2010
$2.7M
Hematopoiesis from Normal and Patient-Derived Induced Pluripotent Stem CellsRC2HL101606 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI WEISS, MITCHELL J · 2009 to 2010
$2.0M
NHLBI NIH HHS K12 HL087064NHLBI NIH HHS RC2 HL101535NHLBI NIH HHS RC2HL101535NHLBI NIH HHS RC2 HL101606NHLBI NIH HHS U01 HL099656NIDDK NIH HHS P30 DK090969NIDDK NIH HHS P30DK090969
6 · The paper itself

Abstract

Induced pluripotent stem cells (iPSCs) hold great promise for modeling human hematopoietic diseases. However, intrinsic variability in the capacities of different iPSC lines for hematopoietic development complicates comparative studies and is currently unexplained. We created and analyzed 3 separate iPSC clones from fibroblasts of 3 different normal individuals using a standardized approach that included excision of integrated reprogramming genes by Cre-Lox mediated recombination. Gene expression profiling and hematopoietic differentiation assays showed that independent lines from the same individual were generally more similar to one another than those from different individuals. However, one iPSC line (WT2.1) exhibited a distinctly different gene expression, proliferation rate, and hematopoietic developmental potential relative to all other iPSC lines. This "outlier" clone also acquired extensive copy number variations (CNVs) during reprogramming, which may be responsible for its divergent properties. Our data indicate how inherent and acquired genetic differences can influence iPSC properties, including hematopoietic potential.

Indexed as

Genetic HeterogeneityCell DifferentiationCell LineCluster AnalysisDNA Copy Number VariationsEpigenesis, GeneticGene Expression ProfilingGene Expression RegulationHematopoiesisHumansInduced Pluripotent Stem CellsThrombopoiesis

Identifiers

PMID23940280
PMCPMC3778548
OpenAlexW2046388457

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.