Evidence map›Paper›PMID 23940276›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2013

Immune tolerance negatively regulates B cells in knock-in mice expressing broadly neutralizing HIV antibody 4E10.

Colleen Doyle-Cooper, Krystalyn E Hudson, Anthony B Cooper, Takayuki Ota, Patrick Skog, Phillip E Dawson, Michael B Zwick, William R Schief, Dennis R Burton, David Nemazee

Open access · greenAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 98 citations in OpenAlex.

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  10. Central tolerance shapes the neutralizing B cell repertoire against a persisting virus in its natural host.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. bioRxiv : the preprint server for biology · 2023
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  20. Conditional antibody expression to avoid central B cell deletion in humanized HIV-1 vaccine mouse models.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Colleen Doyle-Cooper *Department of Immunology and Microbial Science, The Scripps Research Institute.
Krystalyn E Hudson *Department of Immunology and Microbial Science, The Scripps Research Institute.
Anthony B CooperDepartment of Immunology and Microbial Science, The Scripps Research Institute.
Takayuki OtaDepartment of Immunology and Microbial Science, The Scripps Research Institute.
Patrick SkogDepartment of Immunology and Microbial Science, The Scripps Research Institute.
Phillip E DawsonDepartment of Chemistry, The Scripps Research Institute.
Michael B ZwickDepartment of Immunology and Microbial Science, The Scripps Research Institute.
William R SchiefDepartment of Immunology and Microbial Science, The Scripps Research Institute.
Dennis R BurtonDepartment of Immunology and Microbial Science, The Scripps Research Institute.
David NemazeeDepartment of Immunology and Microbial Science, The Scripps Research Institute.
Scripps Research Institute · US

Funding

PATHOGENESIS AND IMMUNOLOGY OF DISEASET32AI007244 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI NEMAZEE, DAVID · 1985 to 2022
$8.8M
Knock-in mice expressing germline-reverted broadly neutralizing HIV antibodiesR01AI073148 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI NEMAZEE, DAVID · 2007 to 2023
$8.2M
Immune Tolerance in Non-Clonal Immune SystemsR01AI059714 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI NEMAZEE, DAVID · 2004 to 2013
$3.9M
Probing the germlines of broadly neutralizing anti-HIV antibodies in knockin miceU01AI078224 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BURTON, DENNIS R. · 2008 to 2012
$3.7M
Knock-in mice expressing germline-reverted broadly neutralizing HIV antibodiesR56AI073148 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI NEMAZEE, DAVID · 2013 to 2013
$514k
NIAID NIH HHS R01 AI059714NIAID NIH HHS R01AI059714NIAID NIH HHS R01 AI073148NIAID NIH HHS R01AI073148NIAID NIH HHS R56 AI073148NIAID NIH HHS T32 AI007244NIAID NIH HHS U01AI078224
6 · The paper itself

Abstract

A major goal of HIV research is to develop vaccines reproducibly eliciting broadly neutralizing Abs (bNAbs); however, this has proved to be challenging. One suggested explanation for this difficulty is that epitopes seen by bNAbs mimic self, leading to immune tolerance. We generated knock-in mice expressing bNAb 4E10, which recognizes the membrane proximal external region of gp41. Unlike b12 knock-in mice, described in the companion article (Ota et al. 2013. J. Immunol. 191: 3179-3185), 4E10HL mice were found to undergo profound negative selection of B cells, indicating that 4E10 is, to a physiologically significant extent, autoreactive. Negative selection occurred by various mechanisms, including receptor editing, clonal deletion, and receptor downregulation. Despite significant deletion, small amounts of IgM and IgG anti-gp41 were found in the sera of 4E10HL mice. On a Rag1⁻/⁻ background, 4E10HL mice had virtually no serum Ig of any kind. These results are consistent with a model in which B cells with 4E10 specificity are counterselected, raising the question of how 4E10 was generated in the patient from whom it was isolated. This represents the second example of a membrane proximal external region-directed bNAb that is apparently autoreactive in a physiological setting. The relative conservation in HIV of the 4E10 epitope might reflect the fact that it is under less intense immunological selection as a result of B cell self-tolerance. The safety and desirability of targeting this epitope by a vaccine is discussed in light of the newly described bNAb 10E8.

Indexed as

AIDS VaccinesAnimalsAntibodies, NeutralizingB-LymphocytesEnzyme-Linked Immunosorbent AssayFlow CytometryGene Knock-In TechniquesHIV AntibodiesHIV AntigensHIV Envelope Protein gp120HIV Envelope Protein gp41Immune ToleranceImmunoglobulin Heavy ChainsImmunoglobulin Light ChainsMiceMice, Inbred C57BLAIDS VaccinesAntibodies, NeutralizingHIV AntibodiesHIV AntigensHIV Envelope Protein gp120HIV Envelope Protein gp41Immunoglobulin Heavy ChainsImmunoglobulin Light Chains

Identifiers

PMID23940276
PMCPMC3773228
OpenAlexW2132773138

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.