Evidence map›Paper›PMID 23936229›Full record

ArticlePloS one2013

CCR5 haplotypes influence HCV serostatus in Caucasian intravenous drug users.

Kristi Huik, Radko Avi, Andrew Carrillo, Nathan Harper, Merit Pauskar, Maarja Sadam, Tõnis Karki, Tõnu Krispin, Ulvi-Kaire Kongo, Tatiana Jermilova and 7 more

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Kristi HuikDepartment of Microbiology, Faculty of Medicine, University of Tartu, Tartu, Estonia.
Radko Avi
Andrew Carrillo
Nathan Harper
Merit Pauskar
Maarja Sadam
Tõnis Karki
Tõnu Krispin
Ulvi-Kaire Kongo
Tatiana Jermilova
Kristi Rüütel
Ave Talu
Katri Abel-Ollo
Anneli Uusküla
Sunil K Ahuja
Weijing He
Irja Lutsar

Funding

Risk Factors for HIV/AIDS in Drug UsersR01DA003574 · NIDA · NEW YORK UNIVERSITY · PI DES JARLAIS, DON C, MCKNIGHT, COURTNEY · 1986 to 2025
$16.2M
Host Genetic Determinants of HIV PathogenesisR37AI046326 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI AHUJA, SUNIL K · 2005 to 2014
$7.8M
NIAID NIH HHS R37 AI046326NIAID NIH HHS R37AI046326NIDA NIH HHS R01 DA003574NIDA NIH HHS R01DA03574
6 · The paper itself

Abstract

backgroundUp to 90% HIV-1 positive intravenous drug users (IDUs) are co-infected with HCV. Although best recognized for its function as a major co-receptor for cell entry of HIV, CC chemokine receptor 5 (CCR5) has also been implicated in the pathogenesis of HCV infection. Here, we investigated whether CCR5 haplotypes influence HIV-1 and HCV seropositivity among 373 Caucasian IDUs from Estonia.

methodsOf these IDUs, 56% and 44% were HIV and HCV seropositive, respectively, and 47% were coinfected. 500 blood donors seronegative for HIV and HCV were also evaluated. CCR5 haplotypes (HHA to HHG*2) were derived after genotyping nine CCR2-CCR5 polymorphisms. The association between CCR5 haplotypes with HIV and/or HCV seropositivity was determined using logistic regression analysis. Co-variates included in the models were length of intravenous drug use, HBV serostatus and copy number of CCL3L1, the gene encoding the most potent HIV-suppressive chemokine and ligand for CCR5.

resultsCompared to IDUs seronegative for both HCV and HIV (HCV-/HIV-), IDUs who were HCV+/HIV- and HCV+/HIV+were 92% and 82%, respectively, less likely to possess the CCR5-HHG*1 haplotype, after controlling for co-variates (P(adjusted) = 1.89 × 10(-4) and 0.003, respectively). This association was mostly due to subjects bearing the CCR5 HHE and HHG*1 haplotype pairs. Approximately 25% and<10% of HCV-/HIV- IDUs and HCV-/HIV- blood donors, respectively, possessed the HHE/HHG*1 genotype.

conclusionsOur findings suggest that HHG*1-bearing CCR5 genotypes influence HCV seropositivity in a group of Caucasian IDUs.

Indexed as

AdultChemokines, CCCoinfectionEstoniaFemaleGene ExpressionHaplotypesHepacivirusHepatitis C, ChronicHIV-1HIV SeropositivityHumansMalePrevalenceReceptors, CCR5Substance Abuse, IntravenousCCL3L1 protein, humanCCR5 protein, humanChemokines, CCReceptors, CCR5

Identifiers

PMID23936229
PMCPMC3723663

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.