Evidence map›Paper›PMID 23936152›Full record

ArticlePloS one2013

Pathoadaptive mutations in Salmonella enterica isolated after serial passage in mice.

Sanna Koskiniemi, Henry S Gibbons, Linus Sandegren, Naeem Anwar, Gary Ouellette, Stacey Broomall, Mark Karavis, Paul McGregor, Alvin Liem, Ed Fochler and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Persistent Infections by Nontyphoidal Salmonella in Humans: Epidemiology and Genetics.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2016
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Sanna KoskiniemiDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Henry S Gibbons
Linus Sandegren
Naeem Anwar
Gary Ouellette
Stacey Broomall
Mark Karavis
Paul McGregor
Alvin Liem
Ed Fochler
Lauren McNew
Carolyn Nicole Rosenzweig
Mikael Rhen
Evan W Skowronski
Dan I Andersson
U.S. Army Combat Capabilities Development Command Chemical Biological CenterUppsala University · SEKarolinska Institutet · SEScience Applications International Corporation (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

How pathogenic bacteria adapt and evolve in the complex and variable environment of the host remains a largely unresolved question. Here we have used whole genome sequencing of Salmonella enterica serovar Typhimurium LT2 populations serially passaged in mice to identify mutations that adapt bacteria to systemic growth in mice. We found unique pathoadaptive mutations in two global regulators, phoQ and stpA, which increase the competitive indexes of the bacteria 3- to 5-fold. Also, all mouse-adapted lineages had changed the orientation of the hin invertable element, resulting in production of a FliC type of flagellum. Competition experiments in mice with locked flagellum mutants showed that strains expressing the FliC type of flagellum had a 5-fold increase in competitive index as compared to those expressing FljB type flagellum. Combination of the flagellum cassette inversion with the stpA mutation increased competitive indexes up to 20-fold. These experiments show that Salmonella can rapidly adapt to a mouse environment by acquiring a few mutations of moderate individual effect that when combined confer substantial increases in growth.

Indexed as

Gene Expression Regulation, BacterialGenome, BacterialMutationAdaptation, PhysiologicalAnimalsBacterial ProteinsDNA-Binding ProteinsDNA NucleotidyltransferasesFemaleFlagellaGenes, RegulatorMiceMice, Inbred BALB CMolecular ChaperonesSalmonella Infections, AnimalSalmonella typhimuriumBacterial ProteinsDNA-Binding ProteinsDNA NucleotidyltransferasesHin recombinaseMolecular ChaperonesPhoQ protein, BacteriaStpA protein, Salmonella typhimurium

Identifiers

PMID23936152
PMCPMC3723669
OpenAlexW2116522612

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.