Evidence map›Paper›PMID 23935923›Full record

ArticlePloS one2013

Molecular threading: mechanical extraction, stretching and placement of DNA molecules from a liquid-air interface.

Andrew C Payne, Michael Andregg, Kent Kemmish, Mark Hamalainen, Charlotte Bowell, Andrew Bleloch, Nathan Klejwa, Wolfgang Lehrach, Ken Schatz, Heather Stark and 4 more

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Andrew C PayneWyss Institute, Harvard University, Boston, Massachusetts, USA.
Michael Andregg
Kent Kemmish
Mark Hamalainen
Charlotte Bowell
Andrew Bleloch
Nathan Klejwa
Wolfgang Lehrach
Ken Schatz
Heather Stark
Adam Marblestone
George Church
Christopher S Own
William Andregg

Funding

Development of Electron Microscopy-based Nucleic Acid Polymer SequencingRC2HG005592 · NHGRI · HARVARD MEDICAL SCHOOL · PI CHURCH, GEORGE M · 2009 to 2010
$2.5M
NHGRI NIH HHS RC2 HG005592
6 · The paper itself

Abstract

We present "molecular threading", a surface independent tip-based method for stretching and depositing single and double-stranded DNA molecules. DNA is stretched into air at a liquid-air interface, and can be subsequently deposited onto a dry substrate isolated from solution. The design of an apparatus used for molecular threading is presented, and fluorescence and electron microscopies are used to characterize the angular distribution, straightness, and reproducibility of stretched DNA deposited in arrays onto elastomeric surfaces and thin membranes. Molecular threading demonstrates high straightness and uniformity over length scales from nanometers to micrometers, and represents an alternative to existing DNA deposition and linearization methods. These results point towards scalable and high-throughput precision manipulation of single-molecule polymers.

Indexed as

AirNucleic Acid ConformationDNADNA, Single-StrandedMicroscopy, ElectronMicroscopy, FluorescenceReproducibility of ResultsSolutionsSurface PropertiesTechnologyDNADNA, Single-StrandedSolutions

Identifiers

PMID23935923
PMCPMC3729692

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.