Evidence map›Paper›PMID 23935911›Full record

ArticlePloS one2013

Whole cell screen for inhibitors of pH homeostasis in Mycobacterium tuberculosis.

Crystal M Darby, Helgi I Ingólfsson, Xiuju Jiang, Chun Shen, Mingna Sun, Nan Zhao, Kristin Burns, Gang Liu, Sabine Ehrt, J David Warren and 4 more

Erratum issuedAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Pyrazinamide killsbioRxiv : the preprint server for biology · 2025
    Article
  2. Common Biological Properties ofACS infectious diseases · 2025
    Article
  3. Review
  4. Article
  5. Article
  6. TargetingMicrobiology (Reading, England) · 2024
    Review
  7. Article
  8. Target Identification in Anti-Tuberculosis Drug Discovery.International journal of molecular sciences · 2023
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. AC2P20 selectively killsRSC advances · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. The Bewildering Antitubercular Action of Pyrazinamide.Microbiology and molecular biology reviews : MMBR · 2020
    Review
  18. Bioenergetic Inhibitors: Antibiotic Efficacy and Mechanisms of Action inFrontiers in cellular and infection microbiology · 2020
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
    Anderson, Olaf S [corrected to Andersen, Olaf S]
5 · Who and what money

Authors and funding

14 authors.

Crystal M DarbyDepartment of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.
Helgi I Ingólfsson
Xiuju Jiang
Chun Shen
Mingna Sun
Nan Zhao
Kristin Burns
Gang Liu
Sabine Ehrt
J David Warren
Olaf S Andersen
Olaf S Anderson
Steven J Brickner
Carl Nathan

Funding

Energetics of Channel-Bilayer InteractionsR01GM021342 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI ANDERSEN, OLAF S. · 1985 to 2021
$9.9M
pH Homeostasis in Mycobacterium tuberculosisR01AI081725 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI EHRT, SABINE · 2009 to 2013
$2.8M
NIAID NIH HHS AI081725NIAID NIH HHS R01 AI081725NIGMS NIH HHS R01 GM021342
6 · The paper itself

Abstract

Bacterial pathogens like Mycobacterium tuberculosis (Mtb) encounter acidic microenvironments in the host and must maintain their acid-base homeostasis to survive. A genetic screen identified two Mtb strains that cannot control intrabacterial pH (pHIB) in an acidic environment; infection with either strain led to severe attenuation in mice. To search for additional proteins that Mtb requires to survive at low pH, we introduced a whole-cell screen for compounds that disrupt pHIB, along with counter-screens that identify ionophores and membrane perturbors. Application of these methods to a natural product library identified four compounds of interest, one of which may inhibit novel pathway(s). This approach yields compounds that may lead to the identification of pathways that allow Mtb to survive in acidic environments, a setting in which Mtb is resistant to most of the drugs currently used to treat tuberculosis.

Indexed as

Acid-Base EquilibriumAnimalsAntitubercular AgentsCell LineHigh-Throughput Screening AssaysHomeostasisHumansHydrogen-Ion ConcentrationMembrane PotentialsMicrobial Sensitivity TestsMycobacterium tuberculosisVero CellsAntitubercular Agents

Identifiers

PMID23935911
PMCPMC3728290

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.