Evidence map›Paper›PMID 23934995›Full record

ArticleG3 (Bethesda, Md.)2013

Expression plasmids for use in Candida glabrata.

Rebecca E Zordan, Yuxia Ren, Shih-Jung Pan, Giuseppe Rotondo, Alejandro De Las Peñas, Joseph Iluore, Brendan P Cormack

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 87 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Rebecca E ZordanDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Yuxia Ren
Shih-Jung Pan
Giuseppe Rotondo
Alejandro De Las Peñas
Joseph Iluore
Brendan P Cormack
Johns Hopkins Medicine · USJohns Hopkins University · US

Funding

AIDS Opportunistic Infectious: Virulence of C. glabrataR01AI046223 · NIAID · JOHNS HOPKINS UNIVERSITY · PI CORMACK, BRENDAN · 1999 to 2014
$4.9M
NIAID NIH HHS R01 AI046223NIAID NIH HHS R01AI046223-13
6 · The paper itself

Abstract

We describe a series of CEN/ARS episomal plasmids containing different Candida glabrata promoters, allowing for a range of constitutive or regulated expression of proteins in C. glabrata. The set of promoters includes three constitutive promoters (EGD2pr, HHT2pr, PDC1pr), two macrophage/phagocytosis-induced promoters (ACO2pr, LYS21pr), and one nutritionally regulated promoter (MET3pr). Each promoter was cloned into two plasmid backbones that differ in their selectable marker, URA3, or the dominant-selectable NAT1 gene, which confers resistance to the drug nourseothricin. Expression from the 12 resulting plasmids was assessed using GFP as a reporter and flow cytometry or quantitative reverse-transcription polymerase chain reaction to assess expression levels. Together this set of plasmids expands the toolkit of expression vectors available for use with C. glabrata.

Indexed as

Candida glabrataDNA, RecombinantGenes, ReporterGenetic MarkersGenetic VectorsPlasmidsPromoter Regions, GeneticDNA, RecombinantGenetic MarkersCandida glabrataexpression vectorinduciblemacrophageMET3

Identifiers

PMID23934995
PMCPMC3789792
OpenAlexW2162956350

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.