ArticleMolecular genetics and genomics : MGG2013
Genome-wide identification and characterisation of F-box family in maize.
Article in Molecular genetics and genomics : MGG, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.
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46 citing papers in PubMed, 76 citations in OpenAlex.
- Genome-Wide Characterization of the F-Box Gene Family inBiology · 2026Article
- Comprehensive genome-wide identification, structural analysis, and cold-responsive expression profiling of double B-box (DBB) transcription factors in melon (Cucumis melo L.).BMC plant biology · 2026Article
- TheAntioxidants (Basel, Switzerland) · 2026Article
- Genome-wide phylogenetic analysis and expression profiling of F-box gene family in Verbena bonariensis under cold stress.BMC plant biology · 2026Article
- SPDC-HG: An accelerator of genomic hybrid breeding in maize.Plant biotechnology journal · 2025Article
- Review
- Identification and analysis of drought-responsive F-box genes in upland rice and involvement of OsFBX148 in ABA response and ROS accumulation.BMC plant biology · 2024Article
- Deciphering the mechanism of E3 ubiquitin ligases in plant responses to abiotic and biotic stresses and perspectives on PROTACs for crop resistance.Plant biotechnology journal · 2024Review
- Identification of Apple Flower Development-Related Gene Families and Analysis of Transcriptional Regulation.International journal of molecular sciences · 2024Article
- Article
- TheMolecules (Basel, Switzerland) · 2024Article
- Multi-locus genome-wide association study for phosphorus use efficiency in a tropical maize germplasm.Frontiers in plant science · 2024Article
- Characterization of the F-Box Gene Family and Its Expression under Osmotic Stress in Birch.Plants (Basel, Switzerland) · 2023Article
- Role of F-box E3-ubiquitin ligases in plant development and stress responses.Plant cell reports · 2023Review
- Insights of auxin signaling F-box genes in wheat (Triticum aestivum L.) and their dynamic expression during the leaf rust infection.Protoplasma · 2023Article
- Article
- Genome-Wide Analysis of the FBA Subfamily of the Poplar F-Box Gene Family and Its Role under Drought Stress.International journal of molecular sciences · 2023Article
- Genome-Wide Analysis and Characterization of Eggplant F-Box Gene Superfamily: Gene Evolution and Expression Analysis under Stress.International journal of molecular sciences · 2022Article
- Article
- Genome-Wide Identification and Expression Patterns of the F-box Family in Poplar under Salt Stress.International journal of molecular sciences · 2022Article
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
F-box-containing proteins, as the key components of the protein degradation machinery, are widely distributed in higher plants and are considered as one of the largest known families of regulatory proteins. The F-box protein family plays a crucial role in plant growth and development and in response to biotic and abiotic stresses. However, systematic analysis of the F-box family in maize (Zea mays) has not been reported yet. In this paper, we identified and characterised the maize F-box genes in a genome-wide scale, including phylogenetic analysis, chromosome distribution, gene structure, promoter analysis and gene expression profiles. A total of 359 F-box genes were identified and divided into 15 subgroups by phylogenetic analysis. The F-box domain was relatively conserved, whereas additional motifs outside the F-box domain may indicate the functional diversification of maize F-box genes. These genes were unevenly distributed in ten maize chromosomes, suggesting that they expanded in the maize genome because of tandem and segmental duplication events. The expression profiles suggested that the maize F-box genes had temporal and spatial expression patterns. Putative cis-acting regulatory DNA elements involved in abiotic stresses were observed in maize F-box gene promoters. The gene expression profiles under abiotic stresses also suggested that some genes participated in stress responsive pathways. Furthermore, ten genes were chosen for quantitative real-time PCR analysis under drought stress and the results were consistent with the microarray data. This study has produced a comparative genomics analysis of the maize ZmFBX gene family that can be used in further studies to uncover their roles in maize growth and development.
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