Evidence map›Paper›PMID 23927969›Full record

ArticleBioorganic & medicinal chemistry letters2013

Substituted pyrrolo[2,3-d]pyrimidines as Cryptosporidium hominis thymidylate synthase inhibitors.

Vidya P Kumar, Kathleen M Frey, Yiqiang Wang, Hitesh K Jain, Aleem Gangjee, Karen S Anderson

Open access · hybridAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry letters, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.1field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 28 citations in OpenAlex.

  1. The antiparasitic effect of C-Phycocyanin nanoparticles on cryptosporidiosis in immunosuppressed mice.Journal of parasitic diseases : official organ of the Indian Society for Parasitology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Vidya P KumarDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT 06520, USA.
Kathleen M Frey
Yiqiang Wang
Hitesh K Jain
Aleem Gangjee
Karen S Anderson
Duquesne University · USYale University · US

Funding

Exploring Novel Targeting Strategies for AIDS Protozoal PathogensR01AI083146 · NIAID · YALE UNIVERSITY · PI ANDERSON, KAREN S. · 2010 to 2019
$3.9M
Discovery of novel PCFT-targeted agentsR01CA152316 · NCI · WAYNE STATE UNIVERSITY · PI GANGJEE, ALEEM, MATHERLY, LARRY H · 2011 to 2015
$2.3M
Exploring Novel Targeting Strategies for AIDS Protozoal PathogensR56AI083146 · NIAID · YALE UNIVERSITY · PI ANDERSON, KAREN S. · 2009 to 2009
$414k
Structure activity and structure property relationships for novel anti-HIV agentsF32AI104334 · NIAID · YALE UNIVERSITY · PI FREY, KATHLEEN MARY · 2013 to 2015
$140k
NCI NIH HHS CA152316NCI NIH HHS R01 CA152316NIAID NIH HHS AI083146NIAID NIH HHS AI104334NIAID NIH HHS F32 AI104334NIAID NIH HHS R01 AI083146NIAID NIH HHS R56 AI083146
6 · The paper itself

Abstract

Cryptosporidiosis, a gastrointestinal disease caused by a protozoan Cryptosporidium hominis is often fatal in immunocompromised individuals. There is little clinical data to show that the existing treatment by nitazoxanide and paromomycin is effective in immunocompromised individuals. Thymidylate synthase (TS) and dihydrofolate reductase (DHFR) are essential enzymes in the folate biosynthesis pathway and are well established as drug targets in cancer and malaria. A novel series of classical antifolates, 2-amino-4-oxo-5-substituted pyrrolo[2,3-d]pyrimidines have been evaluated as Cryptosporidium hominis thymidylate synthase (ChTS) inhibitors. Crystal structure in complex with the most potent compound, a 2'-chlorophenyl with a sulfur bridge with a Ki of 8.83±0.67 nM is discussed in terms of several Van der Waals, hydrophobic and hydrogen bond interactions with the protein residues and the substrate analog 5-fluorodeoxyuridine monophosphate. Of these interactions, two interactions with the non-conserved residues (A287 and S290) offer an opportunity to develop ChTS specific inhibitors. Compound 6 serves as a lead compound for analog design and its crystal structure provides clues for the design of ChTS specific inhibitors.

Indexed as

Antiprotozoal AgentsCryptosporidiumCrystallography, X-RayEnzyme ActivationEnzyme InhibitorsHydrophobic and Hydrophilic InteractionsInhibitory Concentration 50Models, MolecularMolecular StructurePyrimidinesPyrrolesThymidylate SynthaseAntiprotozoal AgentsEnzyme InhibitorsPyrimidinesPyrrolesPyrrolo(2,3-d)pyrimidineThymidylate SynthaseCryptosporidium hominisDihydrofolate reductasePyrrolo[2,3-d]pyrimidinesThymidylate synthase

Identifiers

PMID23927969
PMCPMC3853131
OpenAlexW2033921184

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.