Evidence map›Paper›PMID 23925239›Full record

ArticleNature2013

Connectomic reconstruction of the inner plexiform layer in the mouse retina.

Moritz Helmstaedter, Kevin L Briggman, Srinivas C Turaga, Viren Jain, H Sebastian Seung, Winfried Denk

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Nature, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 474 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
474citing papers in PubMed, 1 pooled it
39.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

474 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,074 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Approaching a connectome of the human foveal retina.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
  7. Natural motion statistics unify direction computations.bioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Connectome of a human foveal retina.bioRxiv : the preprint server for biology · 2026
    Article
  19. Review
  20. Article

414 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Moritz HelmstaedterMax-Planck Institute for Medical Research, D-69120 Heidelberg, Germany. mhelmstaedter@neuro.mpg.de
Kevin L Briggman
Srinivas C Turaga
Viren Jain
H Sebastian Seung
Winfried Denk
Massachusetts Institute of Technology · USMax Planck Society · DEHoward Hughes Medical Institute · USMax Planck Institute for Medical Research · DE

Funding

Mapping the synaptic connectivity and function of sensory neuronal circuitsZIANS003133 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI BRIGGMAN, KEVIN · 2012 to 2017
$9.2M
Howard Hughes Medical Institute
6 · The paper itself

Abstract

Comprehensive high-resolution structural maps are central to functional exploration and understanding in biology. For the nervous system, in which high resolution and large spatial extent are both needed, such maps are scarce as they challenge data acquisition and analysis capabilities. Here we present for the mouse inner plexiform layer--the main computational neuropil region in the mammalian retina--the dense reconstruction of 950 neurons and their mutual contacts. This was achieved by applying a combination of crowd-sourced manual annotation and machine-learning-based volume segmentation to serial block-face electron microscopy data. We characterize a new type of retinal bipolar interneuron and show that we can subdivide a known type based on connectivity. Circuit motifs that emerge from our data indicate a functional mechanism for a known cellular response in a ganglion cell that detects localized motion, and predict that another ganglion cell is motion sensitive.

Indexed as

ConnectomeModels, BiologicalAmacrine CellsAnimalsCell CommunicationImage Processing, Computer-AssistedMiceMice, Inbred C57BLMicroscopy, ElectronNeuropilRetinaRetinal Ganglion Cells

Identifiers

PMID23925239
OpenAlexW2121289914

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.