Evidence map›Paper›PMID 23924245›Full record

ArticleBioconjugate chemistry2013

Facile chemical functionalization of proteins through intein-linked yeast display.

Carrie J Marshall, Nitin Agarwal, Jeet Kalia, Vanessa A Grosskopf, Nicholas A McGrath, Nicholas L Abbott, Ronald T Raines, Eric V Shusta

Abstract read
In one paragraph

Article in Bioconjugate chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Efficient Generation of Hydrazides in Proteins by RadA Split Intein.Chembiochem : a European journal of chemical biology · 2020
    Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Carrie J MarshallDepartment of Chemical and Biological Engineering , University of Wisconsin-Madison, 1415 Engineering Drive, Madison, Wisconsin 53706, United States.
Nitin Agarwal
Jeet Kalia
Vanessa A Grosskopf
Nicholas A McGrath
Nicholas L Abbott
Ronald T Raines
Eric V Shusta
University of Wisconsin–Madison · US

Funding

STRUCTURE--FUNCTION ANALYSIS OF RIBONUCLEASE AR01GM044783 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI RAINES, RONALD T · 1990 to 2021
$7.1M
BIOMOLECULAR ANALYSIS USING LIQUID CRYSTALSR01CA108467 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI ABBOTT, NICHOLAS L · 2004 to 2013
$3.8M
Membrane Proteomics of the Blood-Brain BarrierR01NS052649 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI SHUSTA, ERIC V · 2006 to 2009
$1.3M
NCI NIH HHS R01 CA108467NIGMS NIH HHS R01 GM044783NINDS NIH HHS R01 NS052649
6 · The paper itself

Abstract

Intein-mediated expressed protein ligation (EPL) permits the site-specific chemical customization of proteins. While traditional techniques have used purified, soluble proteins, we have extended these methods to release and modify intein fusion proteins expressed on the yeast surface, thereby eliminating the need for soluble protein expression and purification. To this end, we sought to simultaneously release yeast surface-displayed proteins and selectively conjugate with chemical functionalities compatible with EPL and click chemistry. Single-chain antibodies (scFv) and green fluorescent protein (GFP) were displayed on the yeast surface as fusions to the N-terminus of the Mxe GyrA intein. ScFv and GFP were released from the yeast surface with either a sulfur nucleophile (MESNA) or a nitrogen nucleophile (hydrazine) linked to an azido group. The hydrazine azide permitted the simultaneous release and azido functionalization of displayed proteins, but nonspecific reactions with other yeast proteins were detected, and cleavage efficiency was limited. In contrast, MESNA released significantly more protein from the yeast surface while also generating a unique thioester at the carboxy-terminus of the released protein. These protein thioesters were subsequently reacted with a cysteine alkyne in an EPL reaction and then employed in an azide-alkyne cycloaddition to immobilize the scFv and GFP on an azide-decorated surface with >90% site-specificity. Importantly, the immobilized proteins retained their activity. Since yeast surface display is also a protein engineering platform, these approaches provide a particularly powerful tool for the rapid assessment of engineered proteins.

Indexed as

InteinsAlkynesAzidesClick ChemistryGreen Fluorescent ProteinsImmobilized ProteinsRecombinant Fusion ProteinsSaccharomyces cerevisiaeSingle-Chain AntibodiesAlkynesAzidesGreen Fluorescent ProteinsImmobilized ProteinsRecombinant Fusion ProteinsSingle-Chain Antibodies

Identifiers

PMID23924245
PMCPMC3810395
OpenAlexW1995380923

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.