Evidence map›Paper›PMID 23923050›Full record

ArticlePloS one2013

An integrated peptide-antigen microarray on plasmonic gold films for sensitive human antibody profiling.

Bo Zhang, Justin A Jarrell, Jordan V Price, Scott M Tabakman, Yanguang Li, Ming Gong, Guosong Hong, Ju Feng, Paul J Utz, Hongjie Dai

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Molecular imaging of biological systems with a clickable dye in the broad 800- to 1,700-nm near-infrared window.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  8. Article
  9. Laboratory Diagnosis of Congenital Toxoplasmosis.Journal of clinical microbiology · 2016
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Systemic lupus erythematosus diagnostics in the 'omics' era.International journal of clinical rheumatology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Bo ZhangDepartment of Chemistry, Stanford University, Stanford, California, United States of America.
Justin A Jarrell
Jordan V Price
Scott M Tabakman
Yanguang Li
Ming Gong
Guosong Hong
Ju Feng
Paul J Utz
Hongjie Dai

Funding

Supplement - Inflammatory Triggers in B Cell AutoimmunityU19AI056363 · NIAID · DUKE UNIVERSITY · PI ST. CLAIR, EUGENE WILLIAM · 2003 to 2017
$35.3M
Virginia Mason/UCHSC Autoimmune Prevention CenterU19AI050864 · NIAID · UNIVERSITY OF COLORADO DENVER · PI EISENBARTH, GEORGE S · 2001 to 2011
$29.2M
Vaccination and infection: indicators of immunological health and responsivenessU19AI090019 · NIAID · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 2010 to 2015
$17.3M
Th17 lymphocytes in human autoimmune diseasesU19AI082719 · NIAID · STANFORD UNIVERSITY · PI FATHMAN, CHARLES GARRISON · 2009 to 2013
$3.4M
Carbon Nanotubes as Multi-functional Spectroscopic Markers and Delivery Agents foR01CA135109 · NCI · STANFORD UNIVERSITY · PI DAI, HONGJIE · 2008 to 2012
$1.6M
CIHR 2 OR-92141NCI NIH HHS 5R01CA135109-02NCI NIH HHS R01 CA135109NIAID NIH HHS 1 U19 AI090019NIAID NIH HHS 4 U19 AI090019NIAID NIH HHS 5U19-AI050864NIAID NIH HHS 5 U19-AI056363NIAID NIH HHS 5 U19-AI082719NIAID NIH HHS U19 AI050864NIAID NIH HHS U19 AI056363NIAID NIH HHS U19 AI082719NIAID NIH HHS U19 AI090019PHS HHS 288201000034C
6 · The paper itself

Abstract

High-throughput screening for interactions of peptides with a variety of antibody targets could greatly facilitate proteomic analysis for epitope mapping, enzyme profiling, drug discovery and biomarker identification. Peptide microarrays are suited for such undertaking because of their high-throughput capability. However, existing peptide microarrays lack the sensitivity needed for detecting low abundance proteins or low affinity peptide-protein interactions. This work presents a new peptide microarray platform constructed on nanostructured plasmonic gold substrates capable of metal enhanced NIR fluorescence enhancement (NIR-FE) by hundreds of folds for screening peptide-antibody interactions with ultrahigh sensitivity. Further, an integrated histone peptide and whole antigen array is developed on the same plasmonic gold chip for profiling human antibodies in the sera of systemic lupus erythematosus (SLE) patients, revealing that collectively a panel of biomarkers against unmodified and post-translationally modified histone peptides and several whole antigens allow more accurate differentiation of SLE patients from healthy individuals than profiling biomarkers against peptides or whole antigens alone.

Indexed as

Protein Array AnalysisProteomicsAntibodiesAntigensCluster AnalysisEpitopesHumansLupus Erythematosus, SystemicPeptidesProtein BindingAntibodiesAntigensEpitopesPeptides

Identifiers

PMID23923050
PMCPMC3726620

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.