Evidence map›Paper›PMID 23922366›Full record

ArticleThe Journal of infectious diseases2013

Natural killer cell-mediated innate sieve effect on HIV-1: the impact of KIR/HLA polymorphism on HIV-1 subtype-specific acquisition in east Africa.

Rebecca N Koehler, Galit Alter, Sodsai Tovanabutra, Elmar Saathoff, Miguel A Arroyo, Anne M Walsh, Eric E Sanders-Buell, Leonard Maboko, Michael Hoelscher, Merlin L Robb and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Mucosal immunity in the female genital tract, HIV/AIDS.BioMed research international · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Rebecca N KoehlerUS Military HIV Research Program.
Galit Alter
Sodsai Tovanabutra
Elmar Saathoff
Miguel A Arroyo
Anne M Walsh
Eric E Sanders-Buell
Leonard Maboko
Michael Hoelscher
Merlin L Robb
Nelson L Michael
Francine E McCutchan
Jerome H Kim
Gustavo H Kijak
Jackson Foundation · USWalter Reed Army Institute of Research · USHenry M. Jackson Foundation · USLudwig-Maximilians-Universität München · DERagon Institute of MGH, MIT and Harvard · US

Funding

FILARIASIS REPOSITORY RESEARCH SERVICEN01AI002642 · NIAID · UNIVERSITY OF GEORGIA (UGA) · PI MC CALL, JOHN W · 1985 to 1987
–
NIAID NIH HHS Y01 AI2642-12
6 · The paper itself

Abstract

Here we explore the association between killer cell immunoglobulin-like receptor (KIR)/HLA and human immunodeficiency virus type 1 (HIV-1) acquisition with different viral subtypes circulating in East Africa. In the prospective Cohort Development (CODE) cohort (Mbeya, Tanzania), carriers of KIR3DS1 and its putative ligand (HLA-A or HLA-B Bw4-80Ile alleles) showed increased HIV-1 acquisition risk (odds ratio [OR] = 3.46; 95% confidence interval [CI], 1.12-10.63; P = .04) and a trend for enrichment for subtype A and A-containing recombinants (78% vs. 46%; OR = 4.05; 95% CI, .91-28.30; P = .09) at the expense of subtype C (11% vs. 43%; OR = 0.17; 95% CI, .01-.97; P = .08). In vitro, only natural killer cells from KIR3DS1(+)/HLA-Bw4-80Ile(+) healthy donors showed a 2-fold increased capacity to inhibit replication of subtype C vs subtype A viruses (P = .01). These findings suggest the presence of an innate sieve effect and may inform HIV-1 vaccine development.

Indexed as

GenotypeHIV-1HIV InfectionsHIV SeroprevalenceHLA AntigensHumansKiller Cells, NaturalOdds RatioPolymorphism, GeneticProspective StudiesReceptors, KIRTanzaniaHLA AntigensReceptors, KIREast AfricaHIV-1HLAinnate immunityKIRsieve effectsubtypes

Identifiers

PMID23922366
PMCPMC3778971
OpenAlexW2128831606

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.