Evidence map›Paper›PMID 23921715›Full record

ArticleCellular and molecular life sciences : CMLS2014

Cell density-induced changes in lipid composition and intracellular trafficking.

Simona Kavaliauskiene, Carl-Martin Nymark, Jonas Bergan, Roger Simm, Tuulia Sylvänne, Helena Simolin, Kim Ekroos, Tore Skotland, Kirsten Sandvig

Open access · bronzeAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 44 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Simona KavaliauskieneDepartment of Biochemistry, Institute for Cancer Research, Oslo University Hospital, The Norwegian Radium Hospital, Montebello, 0379, Oslo, Norway.
Carl-Martin Nymark
Jonas Bergan
Roger Simm
Tuulia Sylvänne
Helena Simolin
Kim Ekroos
Tore Skotland
Kirsten Sandvig
Oslo University Hospital · NOZora Biosciences (Finland) · FINorwegian Cancer Society · NOUniversity of Oslo · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell density is one of the extrinsic factors to which cells adapt their physiology when grown in culture. However, little is known about the molecular changes which occur during cell growth and how cellular responses are then modulated. In many cases, inhibitors, drugs or growth factors used for in vitro studies change the rate of cell proliferation, resulting in different cell densities in control and treated samples. Therefore, for a comprehensive data analysis, it is essential to understand the implications of cell density on the molecular level. In this study, we have investigated how lipid composition changes during cell growth, and the consequences it has for transport of Shiga toxin. By quantifying 308 individual lipid species from 17 different lipid classes, we have found that the levels and species distribution of several lipids change during cell growth, with the major changes observed for diacylglycerols, phosphatidic acids, cholesterol esters, and lysophosphatidylethanolamines. In addition, there is a reduced binding and retrograde transport of Shiga toxin in high density cells which lead to reduced intoxication by the toxin. In conclusion, our data provide novel information on how lipid composition changes during cell growth in culture, and how these changes can modulate intracellular trafficking.

Indexed as

Cell CountLipid MetabolismCell Culture TechniquesCell Line, TumorCholesterolDiglyceridesGlobosidesGlycosphingolipidsHeLa CellsHep G2 CellsHumansLysophospholipidsPhosphatidic AcidsProtein TransportShiga ToxinSyntaxin 1CholesterolDiglyceridesGlobosidesglobotrihexosylceramideGlycosphingolipidslysophosphatidylethanolamineLysophospholipidsPhosphatidic AcidsShiga ToxinSTX1A protein, humanSyntaxin 1Trihexosylceramides

Identifiers

PMID23921715
PMCPMC11113877
OpenAlexW1965268787

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.