Evidence map›Paper›PMID 23921386›Full record

ArticleThe Journal of biological chemistry2013

ATP and AMP mutually influence their interaction with the ATP-binding cassette (ABC) adenylate kinase cystic fibrosis transmembrane conductance regulator (CFTR) at separate binding sites.

Christoph O Randak, Qian Dong, Amanda R Ver Heul, Adrian H Elcock, Michael J Welsh

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. NM23 proteins: innocent bystanders or local energy boosters for CFTR?Laboratory investigation; a journal of technical methods and pathology · 2018
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Christoph O RandakDepartments of Pediatrics. Electronic address: christoph-randak@uiowa.edu.
Qian DongDepartments of Pediatrics.
Amanda R Ver HeulDepartments of Pediatrics.
Adrian H ElcockDepartments of Biochemistry.
Michael J WelshDepartments of Internal Medicine; Molecular Physiology and Biophysics, University of Iowa, Iowa City, Iowa 52242; Howard Hughes Medical Institute, Iowa City, Iowa 52242.
Howard Hughes Medical Institute · US

Funding

Pulmonary Toxicology Facility CoreP30ES005605 · NIEHS · UNIVERSITY OF IOWA · PI Brandi Janssen · 1990 to 2026
$40.5M
Vector CoreP01HL051670 · NHLBI · UNIVERSITY OF IOWA · PI MCCRAY, PAUL B · 1993 to 2019
$36.5M
Respiratory virus infection in early cystic fibrosis lung diseaseP01HL091842 · NHLBI · UNIVERSITY OF IOWA · PI STOLTZ, DAVID A · 2008 to 2022
$34.2M
Mechanisms and Binding-Sites in Adenylate Kinase-Dependent CFTR GatingK08HL097071 · NHLBI · UNIVERSITY OF IOWA · PI RANDAK, CHRISTOPH OSKAR · 2009 to 2013
$637k
Howard Hughes Medical InstituteNHLBI NIH HHS HL091842NHLBI NIH HHS HL51670NHLBI NIH HHS K08 HL097071NHLBI NIH HHS K08HL097071NHLBI NIH HHS P01 HL051670NHLBI NIH HHS P01 HL091842NIEHS NIH HHS P30 ES005605
6 · The paper itself

Abstract

Cystic fibrosis transmembrane conductance regulator (CFTR) is an anion channel in the ATP-binding cassette (ABC) transporter protein family. In the presence of ATP and physiologically relevant concentrations of AMP, CFTR exhibits adenylate kinase activity (ATP + AMP &lrarr2; 2 ADP). Previous studies suggested that the interaction of nucleotide triphosphate with CFTR at ATP-binding site 2 is required for this activity. Two other ABC proteins, Rad50 and a structural maintenance of chromosome protein, also have adenylate kinase activity. All three ABC adenylate kinases bind and hydrolyze ATP in the absence of other nucleotides. However, little is known about how an ABC adenylate kinase interacts with ATP and AMP when both are present. Based on data from non-ABC adenylate kinases, we hypothesized that ATP and AMP mutually influence their interaction with CFTR at separate binding sites. We further hypothesized that only one of the two CFTR ATP-binding sites is involved in the adenylate kinase reaction. We found that 8-azidoadenosine 5'-triphosphate (8-N3-ATP) and 8-azidoadenosine 5'-monophosphate (8-N3-AMP) photolabeled separate sites in CFTR. Labeling of the AMP-binding site with 8-N3-AMP required the presence of ATP. Conversely, AMP enhanced photolabeling with 8-N3-ATP at ATP-binding site 2. The adenylate kinase active center probe P(1),P(5)-di(adenosine-5') pentaphosphate interacted simultaneously with an AMP-binding site and ATP-binding site 2. These results show that ATP and AMP interact with separate binding sites but mutually influence their interaction with the ABC adenylate kinase CFTR. They further indicate that the active center of the adenylate kinase comprises ATP-binding site 2.

Indexed as

Adenosine MonophosphateAdenosine TriphosphateAdenylate KinaseBinding SitesCystic Fibrosis Transmembrane Conductance RegulatorHeLa CellsHumansProtein Structure, TertiaryAdenosine MonophosphateAdenosine TriphosphateAdenylate KinaseCFTR protein, humanCystic Fibrosis Transmembrane Conductance RegulatorABC TransporterAMPATPCFTRCystic fibrosisGenetic Diseases

Identifiers

PMID23921386
PMCPMC3779764
OpenAlexW2095378818

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.