Evidence map›Paper›PMID 23921131›Full record

ArticleThe Journal of clinical investigation2013

HDAC3 is essential for DNA replication in hematopoietic progenitor cells.

Alyssa R Summers, Melissa A Fischer, Kristy R Stengel, Yue Zhao, Jonathan F Kaiser, Christina E Wells, Aubrey Hunt, Srividya Bhaskara, Jessica W Luzwick, Shilpa Sampathi and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 89 citations in OpenAlex.

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  8. Epigenetics.Advances in experimental medicine and biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Alyssa R SummersDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Melissa A Fischer
Kristy R Stengel
Yue Zhao
Jonathan F Kaiser
Christina E Wells
Aubrey Hunt
Srividya Bhaskara
Jessica W Luzwick
Shilpa Sampathi
Xi Chen
Mary Ann Thompson
David Cortez
Scott W Hiebert
Vanderbilt University · USVanderbilt-Ingram Cancer CenterSewanee: The University of the South · USUniversity of Utah · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
TRAINING PROGRAM IN ENVIRONMENTAL TOXICOLOGYT32ES007028 · NIEHS · VANDERBILT UNIVERSITY · PI F PETER Guengerich, Fiona Edith Harrison · 1985 to 2026
$15.7M
BIOCHEMICAL &CHEMICAL TRAINING FOR CANCER RESEARCHT32CA009582 · NCI · VANDERBILT UNIVERSITY · PI David K Cortez · 1987 to 2026
$8.8M
Role of AML1-ETO in Acute LeukemiaR01CA064140 · NCI · VANDERBILT UNIVERSITY · PI HIEBERT, SCOTT W · 1994 to 2018
$5.7M
Hdac3 as a therapeutic target in BCL6-dependent lymphomaR01CA164605 · NCI · VANDERBILT UNIVERSITY · PI HIEBERT, SCOTT W · 2012 to 2022
$3.9M
Functional Analysis of Replication Stress Response ProteinsR01CA136933 · NCI · VANDERBILT UNIVERSITY · PI CORTEZ, DAVID K · 2009 to 2013
$1.6M
Functions of Histone Ubiquitination and MethylationR01CA109355 · NCI · VANDERBILT UNIVERSITY · PI SUN, ZU-WEN · 2006 to 2010
$1.2M
Role of Histone Deacetylase 3 in HematopoiesisF32HL090259 · NHLBI · VANDERBILT UNIVERSITY · PI SUMMERS, ALYSSA R · 2007 to 2009
$148k
The Role of MTG16 in Thymocyte DevelopmentF30HL093993 · NHLBI · VANDERBILT UNIVERSITY · PI HUNT, AUBREY · 2008 to 2011
$144k
In vivo and in vitro roles played by Hdac3 in genomic stability maintenanceF32CA138091 · NCI · VANDERBILT UNIVERSITY · PI BHASKARA, SRIVIDYA · 2009 to 2010
$94k
NCI NIH HHS 1F32CA138091NCI NIH HHS 5 T32 CA009582-25NCI NIH HHS F32 CA138091NCI NIH HHS P30 CA068485NCI NIH HHS P30CA68485NCI NIH HHS R01 CA064140NCI NIH HHS R01 CA109355NCI NIH HHS R01-CA109355NCI NIH HHS R01 CA136933NCI NIH HHS R01 CA164605NCI NIH HHS R01-CA164605NCI NIH HHS R01-CA64140NCI NIH HHS T32 CA009582NHLBI NIH HHS 5F32HL090259NHLBI NIH HHS F30 HL093993NHLBI NIH HHS F30HL093993NHLBI NIH HHS F32 HL090259NIDDK NIH HHS P30 DK058404NIDDK NIH HHS P30DK58404NIEHS NIH HHS T32 ES007028
6 · The paper itself

Abstract

Histone deacetylase 3 (HDAC3) contributes to the regulation of gene expression, chromatin structure, and genomic stability. Because HDAC3 associates with oncoproteins that drive leukemia and lymphoma, we engineered a conditional deletion allele in mice to explore the physiological roles of Hdac3 in hematopoiesis. We used the Vav-Cre transgenic allele to trigger recombination, which yielded a dramatic loss of lymphoid cells, hypocellular bone marrow, and mild anemia. Phenotypic and functional analysis suggested that Hdac3 was required for the formation of the earliest lymphoid progenitor cells in the marrow, but that the marrow contained 3-5 times more multipotent progenitor cells. Hdac3(-/-) stem cells were severely compromised in competitive bone marrow transplantation. In vitro, Hdac3(-/-) stem and progenitor cells failed to proliferate, and most cells remained undifferentiated. Moreover, one-third of the Hdac3(-/-) stem and progenitor cells were in S phase 2 hours after BrdU labeling in vivo, suggesting that these cells were impaired in transit through the S phase. DNA fiber-labeling experiments indicated that Hdac3 was required for efficient DNA replication in hematopoietic stem and progenitor cells. Thus, Hdac3 is required for the passage of hematopoietic stem/progenitor cells through the S phase, for stem cell functions, and for lymphopoiesis.

Indexed as

DNA ReplicationAnimalsBone Marrow CellsBone Marrow TransplantationCell DifferentiationCell ProliferationCells, CulturedHematopoietic Stem CellsHistone Deacetylase 3Histone DeacetylasesLymphopoiesisMiceMice, Inbred C57BLMice, KnockoutS PhaseSpleenHistone Deacetylase 3Histone Deacetylases

Identifiers

PMID23921131
PMCPMC3696547
OpenAlexW2018613239

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.