Evidence map›Paper›PMID 23918802›Full record

ArticleMolecular and cellular biology2013

Epigenetic regulation of autophagy by the methyltransferase G9a.

Amaia Artal-Martinez de Narvajas, Timothy S Gomez, Jin-San Zhang, Alexander O Mann, Yoshiyuki Taoda, Jacquelyn A Gorman, Marta Herreros-Villanueva, Thomas M Gress, Volker Ellenrieder, Luis Bujanda and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 137 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
137citing papers in PubMed, 1 pooled it
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

137 citing papers in PubMed, 1 synthesis or guideline pooled it, 215 citations in OpenAlex.

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  20. mBMC cancer · 2024
    Article

77 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Amaia Artal-Martinez de NarvajasDepartment of Immunology and Division of Oncology Research, Schulze Center for Novel Therapeutics, College of Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Timothy S Gomez
Jin-San Zhang
Alexander O Mann
Yoshiyuki Taoda
Jacquelyn A Gorman
Marta Herreros-Villanueva
Thomas M Gress
Volker Ellenrieder
Luis Bujanda
Do-Hyung Kim
Alan P Kozikowski
Alexander Koenig
Daniel D Billadeau
Mayo Clinic · USNovel (United States) · USPhilipps University of Marburg · DEUniversity of Illinois Chicago · USBiogipuzkoa Health Research Institute · ESUniversity of Minnesota · US

Funding

Tissue CoreP50CA102701 · NCI · MAYO CLINIC ROCHESTER · PI BILLADEAU, DANIEL D, PETERSEN, GLORIA M. · 2004 to 2018
$32.7M
Mechanisms of mTOR signaling to early and late stages of autophagyR01GM097057 · NIGMS · UNIVERSITY OF MINNESOTA · PI KIM, DO-HYUNG · 2011 to 2018
$2.7M
Role of Vav1 protooncogene in pancreatic cancerP20CA102701 · NCI · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI PETERSEN, GLORIA M. · 2003 to 2003
$1.5M
NCI NIH HHS CA102701NCI NIH HHS P20 CA102701NCI NIH HHS P50 CA102701NIGMS NIH HHS GM097057NIGMS NIH HHS R01 GM097057
6 · The paper itself

Abstract

Macroautophagy is an evolutionarily conserved cellular process involved in the clearance of proteins and organelles. Although the cytoplasmic machinery that orchestrates autophagy induction during starvation, hypoxia, or receptor stimulation has been widely studied, the key epigenetic events that initiate and maintain the autophagy process remain unknown. Here we show that the methyltransferase G9a coordinates the transcriptional activation of key regulators of autophagosome formation by remodeling the chromatin landscape. Pharmacological inhibition or RNA interference (RNAi)-mediated suppression of G9a induces LC3B expression and lipidation that is dependent on RNA synthesis, protein translation, and the methyltransferase activity of G9a. Under normal conditions, G9a associates with the LC3B, WIPI1, and DOR gene promoters, epigenetically repressing them. However, G9a and G9a-repressive histone marks are removed during starvation and receptor-stimulated activation of naive T cells, two physiological inducers of macroautophagy. Moreover, we show that the c-Jun N-terminal kinase (JNK) pathway is involved in the regulation of autophagy gene expression during naive-T-cell activation. Together, these findings reveal that G9a directly represses genes known to participate in the autophagic process and that inhibition of G9a-mediated epigenetic repression represents an important regulatory mechanism during autophagy.

Indexed as

Epigenesis, GeneticAnimalsAutophagyAutophagy-Related ProteinsCarrier ProteinsChromatinChromatin Assembly and DisassemblyFibroblastsGlucoseHeLa CellsHistocompatibility AntigensHistone-Lysine N-MethyltransferaseHumansJNK Mitogen-Activated Protein KinasesMembrane ProteinsMiceAutophagy-Related ProteinsCarrier ProteinsChromatinEHMT2 protein, humanGlucoseHistocompatibility AntigensHistone-Lysine N-MethyltransferaseJNK Mitogen-Activated Protein KinasesMAP1LC3B protein, humanMembrane ProteinsMicrotubule-Associated ProteinsRNA, Small InterferingWIPI1 protein, human

Identifiers

PMID23918802
PMCPMC3811684
OpenAlexW2119981278

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.