Evidence map›Paper›PMID 23918739›Full record

ArticleArthritis and rheumatism2013

Multiple lupus-associated ITGAM variants alter Mac-1 functions on neutrophils.

Yebin Zhou, Jianming Wu, Dennis F Kucik, Nathan B White, David T Redden, Alexander J Szalai, Daniel C Bullard, Jeffrey C Edberg

Open access · greenAbstract read
In one paragraph

Article in Arthritis and rheumatism, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 57 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Targeting Neutrophil βBiomolecules · 2023
    Review
  7. CD11b agonists offer a novel approach for treating lupus nephritis.Translational research : the journal of laboratory and clinical medicine · 2022
    Review
  8. Article
  9. Immunogenetics of Lupus Erythematosus.Advances in experimental medicine and biology · 2022
    Article
  10. Article
  11. A Genetic Model of Constitutively Active Integrin CD11b/CD18.Journal of immunology (Baltimore, Md. : 1950) · 2020
    Article
  12. Article
  13. Mice expressing the variant rs1143679 allele of ITGAM (CD11b) show impaired DC-mediated T cell proliferation.Mammalian genome : official journal of the International Mammalian Genome Society · 2019
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yebin ZhouUniversity of Alabama at, Birmingham.
Jianming Wu
Dennis F Kucik
Nathan B White
David T Redden
Alexander J Szalai
Daniel C Bullard
Jeffrey C Edberg
University of Alabama at Birmingham · USBirmingham VA Medical Center · US

Funding

Program Project in the Genetics of SLEP01AR049084 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2002 to 2012
$12.7M
UAB Center for Clinical and Translational Science (CCTS) UL1UL1TR000165 · NCATS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2012 to 2013
$9.6M
ROS Modulation of Innate and Adaptive Immunity in RAP30AR048311 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI MOUNTZ, JOHN D · 2001 to 2017
$9.5M
C-reactive protein in acute kidney injuryR01DK099092 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SZALAI, ALEXANDER J · 2014 to 2017
$1.3M
Functional Evaluation of ITGAM SNPsR21DA026956 · NIDA · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BULLARD, DANIEL C, EDBERG, JEFFREY C · 2009 to 2010
$921k
FcgRIIB links CRP signals with ITGAM functions: a G x G x G model of SLE.R21AR058864 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SZALAI, ALEXANDER J · 2009 to 2010
$783k
NCATS NIH HHS UL1 TR000165NCATS NIH HHS UL1-TR-000165NIAMS NIH HHS 5P30-AR-048311NIAMS NIH HHS P01 AR049084NIAMS NIH HHS P01-AR-49084NIAMS NIH HHS P30 AR048311NIAMS NIH HHS R21 AR058864NIAMS NIH HHS R21-AR-058864NIDA NIH HHS R21 DA026956NIDA NIH HHS R21-DA-026956NIDDK NIH HHS R01 DK099092
6 · The paper itself

Abstract

objectiveMultiple studies have demonstrated that single-nucleotide polymorphisms (SNPs) in the ITGAM locus (including the nonsynonymous SNPs rs1143679, rs1143678, and rs1143683) are associated with systemic lupus erythematosus (SLE). ITGAM encodes the protein CD11b, a subunit of the β2 integrin Mac-1. The purpose of this study was to determine the effects of ITGAM genetic variation on the biologic functions of neutrophil Mac-1.

methodsNeutrophils from ITGAM-genotyped and -sequenced healthy donors were isolated for functional studies. The phagocytic capacity of neutrophil ITGAM variants was probed with complement-coated erythrocytes, serum-treated zymosan, heat-treated zymosan, and IgG-coated erythrocytes. The adhesion capacity of ITGAM variants, in adhering to either purified intercellular adhesion molecule 1 or tumor necrosis factor α-stimulated endothelial cells, was assessed in a flow chamber. Expression levels of total CD11b and activation of CD11b were assessed by flow cytometry.

resultsMac-1-mediated neutrophil phagocytosis, determined in cultures with 2 different complement-coated particles, was significantly reduced in individuals with nonsynonymous variant alleles of ITGAM. This reduction in phagocytosis was related to variation at either rs1143679 (in the β-propeller region) or rs1143678/rs1143683 (highly linked SNPs in the cytoplasmic/calf-1 regions). Phagocytosis mediated by Fcγ receptors was also significantly reduced in donors with variant ITGAM alleles. Similarly, firm adhesion of neutrophils was significantly reduced in individuals with variant ITGAM alleles. These functional alterations were not attributable to differences in total receptor expression or activation.

conclusionThe nonsynonymous ITGAM variants rs1143679 and rs1143678/rs113683 contribute to altered Mac-1 function on neutrophils. These results underscore the need to consider multiple nonsynonymous SNPs when assessing the functional consequences of ITGAM variation on immune cell processes and the risk of SLE.

Indexed as

CD11b AntigenFemaleFlow CytometryGenetic Predisposition to DiseaseGenetic VariationGenotypeHumansLupus Erythematosus, SystemicMacrophage-1 AntigenMaleNeutrophilsPhagocytosisPolymorphism, Single NucleotideRisk FactorsCD11b AntigenITGAM protein, humanMacrophage-1 Antigen

Identifiers

PMID23918739
PMCPMC3969028
OpenAlexW1620959683

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.