Evidence map›Paper›PMID 23917911›Full record

ArticleInfection control and hospital epidemiology2013

Detection of mixed populations of Clostridium difficile from symptomatic patients using capillary-based polymerase chain reaction ribotyping.

Adam A Behroozian, Jeffrey P Chludzinski, Eugene S Lo, Sarah A Ewing, Sheila Waslawski, Duane W Newton, Vincent B Young, David M Aronoff, Seth T Walk

Abstract read
In one paragraph

Article in Infection control and hospital epidemiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Journal of clinical medicine · 2020
    Article
  9. Article
  10. A Review of Mixed StrainFrontiers in microbiology · 2019
    Review
  11. Phenotypic Characterization of Non-toxigenicFrontiers in microbiology · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Role of Coinfecting Strains in Recurrent Clostridium difficile Infection.Infection control and hospital epidemiology · 2016
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Adam A Behroozian *Department of Internal Medicine, Division of Infectious Diseases, University of Michigan Health System, Ann Arbor, Michigan.
Jeffrey P Chludzinski *Department of Internal Medicine, Division of Infectious Diseases, University of Michigan Health System, Ann Arbor, Michigan.
Eugene S LoDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan Health System, Ann Arbor, Michigan.
Sarah A EwingDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan Health System, Ann Arbor, Michigan.
Sheila WaslawskiDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan Health System, Ann Arbor, Michigan.
Duane W NewtonClinical Microbiology Laboratories, Department of Pathology, University of Michigan Health System, Ann Arbor, Michigan.
Vincent B YoungDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan Health System, Ann Arbor, Michigan.
David M AronoffDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan Health System, Ann Arbor, Michigan.
Seth T WalkDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan Health System, Ann Arbor, Michigan.

Funding

Research Education CoreP30AG024824 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Neil Alexander · 2004 to 2026
$29.2M
The Interplay Between Host Immunity and Clostridium difficile PathogenesisU19AI090871 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI YOUNG, VINCENT B · 2010 to 2014
$7.5M
Weight gain trajectory and life spanP60AG008808 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HALTER, JEFFREY B. · 1994 to 2003
$5.9M
THE FUNCTIONS OF EOSINOPHILSR01AI009728 · NIAID · UNIVERSITY OF UTAH · PI GLEICH, GERALD J · 1985 to 2006
$2.4M
Phylogenomic epidemiology of Clostridium difficileK01AI097281 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WALK, SETH T · 2012 to 2016
$509k
THE FUNCTIONS OF EOSINOPHILSR37AI009728 · NIAID · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI GLEICH, GERALD J · 1987 to 1996
–
MICHIGAN GERIATRICS RESEARCH AND TRAINING CENTERP30AG008808 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HALTER, JEFFREY B. · 1989 to 1993
–
NIAID NIH HHS 1K01AI09728101A1NIAID NIH HHS 1U19AI090871-01NIAID NIH HHS K01 AI097281NIAID NIH HHS U19 AI090871NIA NIH HHS AG024824NIA NIH HHS AG08808NIA NIH HHS P30 AG024824NIA NIH HHS P60 AG008808
6 · The paper itself

Abstract

objectiveTo investigate the simultaneous occurrence of more than 1 Clostridium difficile ribotype in patients' stool samples at the time of diagnostic testing.

methodsStool samples submitted for diagnostic testing for the presence of toxigenic C. difficile were obtained for 102 unique patients. A total of 95 single colonies of C. difficile per stool sample were isolated on selective media, subcultured alongside negative (uninoculated) controls, and polymerase chain reaction (PCR) ribotyped using capillary gel electrophoresis.

resultsCapillary-based PCR ribotyping was successful for 9,335 C. difficile isolates, yielding a median of 93 characterized isolates per stool sample (range, 69-95). More than 1 C. difficile ribotype was present in 16 of 102 (16%) C. difficile infection (CDI) cases; 2 of the 16 mixtures were composed of at least 3 ribotypes, while the remaining 14 were composed of at least 2.

conclusionsDeep sampling of patient stool samples coupled with capillary-based PCR ribotyping identified a high rate of mixed CDI cases compared with previous estimates. Studies seeking to quantify the clinical significance of particular C. difficile ribotypes should account for mixed cases of disease.

Indexed as

RibotypingClostridioides difficileElectrophoresis, CapillaryEnterocolitis, PseudomembranousFecesFemaleHumansMalePolymerase Chain Reaction

Identifiers

PMID23917911
PMCPMC4016961

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.