Evidence map›Paper›PMID 23917316›Full record

ArticleAntimicrobial agents and chemotherapy2013

SbcCD-mediated processing of covalent gyrase-DNA complex in Escherichia coli.

Sandra Aedo, Yuk-Ching Tse-Dinh

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Sandra AedoDepartment of Biochemistry & Molecular Biology, New York Medical College, Valhalla, New York, USA.
Yuk-Ching Tse-Dinh
Florida International University · USNew York Medical College · US

Funding

Bacterial cell killing topoisomerase I--DNA lesionR01AI069313 · NIAID · NEW YORK MEDICAL COLLEGE · PI TSE-DINH, YUK-CHING · 2006 to 2014
$3.4M
NIAID NIH HHS R01 AI069313NIAID NIH HHS R01AI069313
6 · The paper itself

Abstract

Quinolones trap the covalent gyrase-DNA complex in Escherichia coli, leading to cell death. Processing activities for trapped covalent complex have not been characterized. A mutant strain lacking SbcCD nuclease activity was examined for both accumulation of gyrase-DNA complex and viability after quinolone treatment. Higher complex levels were found in ΔsbcCD cells than in wild-type cells after incubation with nalidixic acid and ciprofloxacin. However, SbcCD activity protected cells against the bactericidal action of nalidixic acid but not ciprofloxacin.

Indexed as

Anti-Bacterial AgentsCiprofloxacinDeoxyribonucleasesDNA, BacterialDNA GyraseEscherichia coliEscherichia coli ProteinsExonucleasesNalidixic AcidAnti-Bacterial AgentsCiprofloxacinDeoxyribonucleasesDNA, BacterialDNA GyraseEscherichia coli ProteinsExonucleasesNalidixic AcidSbcC protein, E colisbcD protein, E coli

Identifiers

PMID23917316
PMCPMC3811449
OpenAlexW2172066883

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.