ArticleNature communications2013
Genome sequence of the date palm Phoenix dactylifera L.
Article in Nature communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 131 papers, 1 of them a synthesis that pooled it.
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Who cites it
131 citing papers in PubMed, 1 synthesis or guideline pooled it, 324 citations in OpenAlex.
- Neotropical palms: from their conservation to economic potential.Frontiers in plant science · 2024Pooled it
- Underground Architects of Resilience: Biodiversity and Role of Arbuscular Mycorrhizal Fungi in Date Palm (Journal of fungi (Basel, Switzerland) · 2026Review
- Genetic diversity and population structure of Omani date palm assessed by SSR markers.Frontiers in plant science · 2026Article
- Convergent evolution of sex chromosomes in two palm species, Phoenix dactylifera and Kerriodoxa elegans.Annals of botany · 2025Article
- Expansion of açaí fruit and heart-of-palm production promotes hybridization and introgression in Euterpe palms.BMC plant biology · 2025Article
- Comparative genomics analyses reveal genomic variation and evolutionary adaptation in Dendrobium orchids.Nature communications · 2025Article
- The Complete Plastome of 'Mejhoul' Date Palm: Genomic Markers and Varietal Identification.International journal of molecular sciences · 2025Article
- Stress Regulatory capabilities discovered in late embryogenesis abundant (LEA) proteins expressed during pecan (Carya illinoinensis) kernel development.BMC genomics · 2025Article
- Therapeutic Power of Date Fruit (Food science & nutrition · 2025Review
- Comparative Genomics and Draft Genome Assembly of the Elite Tunisian Date Palm Cultivar Deglet Nour: Insights into the Genetic Variations Linked to Fruit Ripening and Quality Traits.International journal of molecular sciences · 2025Article
- Conserved stress-responsive genes involved in the early development of Euterpe Edulis.Scientific reports · 2025Article
- Genome-wide and transcriptome analysis of PdWRKY transcription factors in date palm (Phoenix dactylifera) revealing insights into heat and drought stress tolerance.BMC genomics · 2025Article
- Independent evolution of betulin biosynthesis in Inonotus obliquus.Scientific reports · 2025Article
- Environmental drivers of date fruit unripening syndrome in dryland regions of Saudi Arabia.Frontiers in plant science · 2025Article
- Chromosome scale genome assembly and annotation of coconut cultivar Chowghat Green Dwarf.Scientific reports · 2024Article
- Multifaceted natural drought response mechanisms in three elite date palm cultivars uncovered by expressed sequence tags analysis.Scientific reports · 2024Article
- Chromosome-scale Elaeis guineensis and E. oleifera assemblies: comparative genomics of oil palm and other Arecaceae.G3 (Bethesda, Md.) · 2024Article
- Physical properties and mass models of Deglet Noor and Arichti semi-dry Algerian date fruits: A comparative study.Food science & nutrition · 2024Article
- Genomic insights into the chromosomal elongation in a family of Collembola.Proceedings. Biological sciences · 2024Article
- De novo transcriptomic analysis of Doum Palm (Hyphaene compressa) revealed an insight into its potential drought tolerance.PloS one · 2024Article
71 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
44 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Date palm (Phoenix dactylifera L.) is a cultivated woody plant species with agricultural and economic importance. Here we report a genome assembly for an elite variety (Khalas), which is 605.4 Mb in size and covers >90% of the genome (~671 Mb) and >96% of its genes (~41,660 genes). Genomic sequence analysis demonstrates that P. dactylifera experienced a clear genome-wide duplication after either ancient whole genome duplications or massive segmental duplications. Genetic diversity analysis indicates that its stress resistance and sugar metabolism-related genes tend to be enriched in the chromosomal regions where the density of single-nucleotide polymorphisms is relatively low. Using transcriptomic data, we also illustrate the date palm's unique sugar metabolism that underlies fruit development and ripening. Our large-scale genomic and transcriptomic data pave the way for further genomic studies not only on P. dactylifera but also other Arecaceae plants.
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