Evidence map›Paper›PMID 23915312›Full record

ArticleCell communication and signaling : CCS2013

The cytohesin paralog Sec7 of Dictyostelium discoideum is required for phagocytosis and cell motility.

Rolf Müller, Claudia Herr, Salil K Sukumaran, Napoleon Nosa Omosigho, Markus Plomann, Tanja Y Riyahi, Maria Stumpf, Karthic Swaminathan, Marios Tsangarides, Kyriacos Yiannakou and 5 more

Open access · goldAbstract read
In one paragraph

Article in Cell communication and signaling : CCS, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Frontiers in cell and developmental biology · 2021
    Review
  5. HGF-induced migration depends on the PI(3,4,5)PThe Journal of cell biology · 2019
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Rolf MüllerInstitute of Biochemistry I, Medical Faculty, Center for Molecular Medicine Cologne and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases, University of Cologne, 50931 Köln, Germany.
Claudia Herr
Salil K Sukumaran
Napoleon Nosa Omosigho
Markus Plomann
Tanja Y Riyahi
Maria Stumpf
Karthic Swaminathan
Marios Tsangarides
Kyriacos Yiannakou
Rosemarie Blau-Wasser
Christoph Gallinger
Michael Schleicher
Waldemar Kolanus
Angelika A Noegel
University of Cologne · DECologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases · DELudwig-Maximilians-Universität München · DEUniversity of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDictyostelium harbors several paralogous Sec7 genes that encode members of three subfamilies of the Sec7 superfamily of guanine nucleotide exchange factors. One of them is the cytohesin family represented by three members in D. discoideum, SecG, Sec7 and a further protein distinguished by several transmembrane domains. Cytohesins are characterized by a Sec7-PH tandem domain and have roles in cell adhesion and migration.

resultsWe study here Sec7. In vitro its PH domain bound preferentially to phosphatidylinositol 3,4-bisphosphate (PI(3,4)P2), phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) and phosphatidylinositol 3,4,5-trisphosphate (PI(3,4,5)P3). When following the distribution of GFP-Sec7 in vivo we observed the protein in the cytosol and at the plasma membrane. Strikingly, when cells formed pseudopods, macropinosomes or phagosomes, GFP-Sec7 was conspicuously absent from areas of the plasma membrane which were involved in these processes. Mutant cells lacking Sec7 exhibited an impaired phagocytosis and showed significantly reduced speed and less persistence during migration. Cellular properties associated with mammalian cytohesins like cell-cell and cell-substratum adhesion were not altered. Proteins with roles in membrane trafficking and signal transduction have been identified as putative interaction partners consistent with the data obtained from mutant analysis.

conclusionsSec7 is a cytosolic component and is associated with the plasma membrane in a pattern distinctly different from the accumulation of PI(3,4,5)P3. Mutant analysis reveals that loss of the protein affects cellular processes that involve membrane flow and the actin cytoskeleton.

Indexed as

Amino Acid SequenceCell AdhesionChemotaxisDictyosteliumGuanine Nucleotide Exchange FactorsMolecular Sequence DataPhagocytosisProtein Structure, TertiaryProtozoan ProteinsRecombinant ProteinsGuanine Nucleotide Exchange FactorsProtozoan ProteinsRecombinant Proteins

Identifiers

PMID23915312
PMCPMC3737031
OpenAlexW2127659358

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.