Evidence map›Paper›PMID 23915008›Full record

ArticleMolecular plant pathology2014

Small-molecule inhibitors suppress the expression of both type III secretion and amylovoran biosynthesis genes in Erwinia amylovora.

Fan Yang, Schuyler S Korban, P Lawrence Pusey, Michael Elofsson, George W Sundin, Youfu Zhao

Open access · greenAbstract read
In one paragraph

Article in Molecular plant pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
6.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. Article
  3. Complementary roles of EPS, T3SS and Expansin for virulence ofbioRxiv : the preprint server for biology · 2024
    Article
  4. Review
  5. Control ofPlants (Basel, Switzerland) · 2022
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. International journal of molecular sciences · 2020
    Article
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  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Fan YangDepartment of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Schuyler S Korban
P Lawrence Pusey
Michael Elofsson
George W Sundin
Youfu Zhao
University of Illinois Urbana-Champaign · USAgricultural Research Service · USIllinois Department of Natural Resources · USMichigan State University · USUmeå University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The type III secretion system (T3SS) and exopolysaccharide (EPS) amylovoran are two essential pathogenicity factors in Erwinia amylovora, the causal agent of the serious bacterial disease fire blight. In this study, small molecules that inhibit T3SS gene expression in E. amylovora under hrp (hypersensitive response and pathogenicity)-inducing conditions were identified and characterized using green fluorescent protein (GFP) as a reporter. These compounds belong to salicylidene acylhydrazides and also inhibit amylovoran production. Microarray analysis of E. amylovora treated with compounds 3 and 9 identified a total of 588 significantly differentially expressed genes. Among them, 95 and 78 genes were activated and suppressed by both compounds, respectively, when compared with the dimethylsulphoxide (DMSO) control. The expression of the majority of T3SS genes in E. amylovora, including hrpL and the avrRpt2 effector gene, was suppressed by both compounds. Compound 3 also suppressed the expression of amylovoran precursor and biosynthesis genes. However, both compounds induced significantly the expression of glycogen biosynthesis genes and siderophore biosynthesis, regulatory and transport genes. Furthermore, many membrane, lipoprotein and exported protein-encoding genes were also activated by both compounds. Similar expression patterns were observed for compounds 1, 2 and 4. Using crab apple flower as a model, compound 3 was capable of reducing disease development in pistils. These results suggest a common inhibition mechanism shared by salicylidene acylhydrazides and indicate that small-molecule inhibitors that disable T3SS function could be explored to control fire blight disease.

Indexed as

Bacterial Secretion SystemsBiosynthetic PathwaysDisease ProgressionErwinia amylovoraFlowersGene Expression ProfilingGene Expression Regulation, BacterialGenes, BacterialMalusMolecular Sequence DataOligonucleotide Array Sequence AnalysisPlant DiseasesPolysaccharides, BacterialPromoter Regions, GeneticReal-Time Polymerase Chain ReactionReproducibility of ResultsamylovoranBacterial Secretion SystemsPolysaccharides, BacterialSmall Molecule Libraries

Identifiers

PMID23915008
PMCPMC6638656
OpenAlexW2110257759

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.