Evidence map›Paper›PMID 23913687›Full record

ArticleThe Journal of biological chemistry2013

Yeast phospholipase C is required for normal acetyl-CoA homeostasis and global histone acetylation.

Luciano Galdieri, Jennifer Chang, Swati Mehrotra, Ales Vancura

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Nuclear phosphoinositide regulation of chromatin.Journal of cellular physiology · 2018
    Review
  7. Article
  8. Functions for diverse metabolic activities in heterochromatin.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  9. Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Luciano GaldieriFrom the Department of Biological Sciences, St. John's University, Queens, New York 11439.
Jennifer Chang
Swati Mehrotra
Ales Vancura
St. John's University · US

Funding

Intermediary Metabolism, Histone Acetylation, and Transcriptional RegulationR15GM106324 · NIGMS · ST. JOHN'S UNIVERSITY · PI VANCURA, ALES · 2013 to 2013
$377k
Role of Phospholipase C in Transcriptional RegulationR15GM087674 · NIGMS · ST. JOHN'S UNIVERSITY · PI VANCURA, ALES · 2009 to 2009
$245k
NIGMS NIH HHS GM087674NIGMS NIH HHS R15 GM087674NIGMS NIH HHS R15 GM106324
6 · The paper itself

Abstract

Phospholipase C (Plc1p) is required for the initial step of inositol polyphosphate (InsP) synthesis, and yeast cells with deletion of the PLC1 gene are completely devoid of any InsPs and display aberrations in transcriptional regulation. Here we show that Plc1p is required for a normal level of histone acetylation; plc1Δ cells that do not synthesize any InsPs display decreased acetylation of bulk histones and global hypoacetylation of chromatin histones. In accordance with the role of Plc1p in supporting histone acetylation, plc1Δ mutation is synthetically lethal with mutations in several subunits of SAGA and NuA4 histone acetyltransferase (HAT) complexes. Conversely, the growth rate, sensitivity to multiple stresses, and the transcriptional defects of plc1Δ cells are partially suppressed by deletion of histone deacetylase HDA1. The histone hypoacetylation in plc1Δ cells is due to the defect in degradation of repressor Mth1p, and consequently lower expression of HXT genes and reduced conversion of glucose to acetyl-CoA, a substrate for HATs. The histone acetylation and transcriptional defects can be partially suppressed and the overall fitness improved in plc1Δ cells by increasing the cellular concentration of acetyl-CoA. Together, our data indicate that Plc1p and InsPs are required for normal acetyl-CoA homeostasis, which, in turn, regulates global histone acetylation.

Indexed as

AcetylationAcetyl Coenzyme ABiological TransportChromatinGene Expression Regulation, EnzymologicGlucoseHistone AcetyltransferasesHistone DeacetylasesHistonesHomeostasisInositol PhosphatesMutationPhenotypeSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTemperatureAcetyl Coenzyme AChromatinGlucoseHistone AcetyltransferasesHistone DeacetylasesHistonesInositol PhosphatesPlc1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsType C PhospholipasesAcetyl-coenzyme AChromatinChromatin Histone ModificationHistonesInositol PhosphatesMetabolismPhospholipase CTranscription

Identifiers

PMID23913687
PMCPMC3784712
OpenAlexW2030612939

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.