Evidence map›Paper›PMID 23907132›Full record

ArticleCell cycle (Georgetown, Tex.)2013

DNA polymerases are error-prone at RecA-mediated recombination intermediates.

Richard T Pomerantz, Myron F Goodman, Michael E O'Donnell

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Generation and Repair of Postreplication Gaps in Escherichia coli.Microbiology and molecular biology reviews : MMBR · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Richard T PomerantzFels Institute for Cancer Research, Department of Biochemistry, Temple University School of Medicine, Philadelphia, PA, USA. richard.pomerantz@temple.edu
Myron F Goodman
Michael E O'Donnell
Philadelphia University · USRockefeller University · USSouthern California University for Professional Studies · US

Funding

Biochemical Basis of SOS-Induced MutagenesisR01ES012259 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GOODMAN, MYRON · 2003 to 2017
$5.6M
ERROR CORRECTION IN DNA SYNTHESIS--A BIOCHEMICAL STUDYR37GM021422 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GOODMAN, MYRON · 2000 to 2009
$3.5M
BIOCHEMICAL MECHANISM OF DNA POLYMERASE III HOLOENZYMER01GM038839 · NIGMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI O'DONNELL, MICHAEL E · 1988 to 2014
$2.9M
BIOCHEMICAL MECHANISM OF DNA POLYMERASE III HOLOENZYMER37GM038839 · NIGMS · ROCKEFELLER UNIVERSITY · PI O'DONNELL, MICHAEL E · 1997 to 2006
$2.2M
ERROR CORRECTION IN DNA SYNTHESIS: A BIOCHEMICAL STUDYR01GM021422 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GOODMAN, MYRON · 1985 to 2014
$1.6M
Mechanisms and Regulation of Human Translesion DNA PolymerasesR00CA160648 · NCI · TEMPLE UNIV OF THE COMMONWEALTH · PI POMERANTZ, RICHARD T · 2013 to 2015
$724k
Howard Hughes Medical InstituteNCI NIH HHS R00 CA160648NCI NIH HHS R00CA160648NIEHS NIH HHS ES012259NIEHS NIH HHS R01 ES012259NIGMS NIH HHS GM21422NIGMS NIH HHS GM38839NIGMS NIH HHS R01 GM021422NIGMS NIH HHS R01 GM038839NIGMS NIH HHS R37 GM021422NIGMS NIH HHS R37 GM038839
6 · The paper itself

Abstract

Genetic studies have suggested that Y-family translesion DNA polymerase IV (DinB) performs error-prone recombination-directed replication (RDR) under conditions of stress due to its ability to promote mutations during double-strand break (DSB) repair in growth-limited E. coli cells. In recent studies we have demonstrated that pol IV is preferentially recruited to D-loop recombination intermediates at stress-induced concentrations and is highly mutagenic during RDR in vitro. These findings verify longstanding genetic data that have implicated pol IV in promoting stress-induced mutagenesis at D-loops. In this Extra View, we demonstrate the surprising finding that A-family pol I, which normally exhibits high-fidelity DNA synthesis, is highly error-prone at D-loops like pol IV. These findings indicate that DNA polymerases are intrinsically error-prone at RecA-mediated D-loops and suggest that auxiliary factors are necessary for suppressing mutations during RDR in non-stressed proliferating cells.

Indexed as

DNADNA DamageDNA Polymerase betaDNA ReplicationModels, GeneticMutagenesisRec A RecombinasesRecombination, GeneticDNADNA Polymerase betaRec A Recombinasestriplex DNAadaptive mutagenesisbreak-induced replicationDNA replicationdouble-strand break repairhomologous recombinationstress-induced mutagenesis

Identifiers

PMID23907132
PMCPMC3865045
OpenAlexW2037273478

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.