Evidence map›Paper›PMID 23907125›Full record

ArticleCell cycle (Georgetown, Tex.)2013

Genetic variants and mutations of PPM1D control the response to DNA damage.

Crissy Dudgeon, Sathyavageeswaran Shreeram, Kan Tanoue, Sharlyn J Mazur, Ahmed Sayadi, Robert C Robinson, Ettore Appella, Dmitry V Bulavin

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 44 citations in OpenAlex.

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  11. Cancers · 2021
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  12. High Expression ofCancers · 2021
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  17. Spinal cord high-grade infiltrating gliomas in adults: clinico-pathological and molecular evaluation.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Crissy DudgeonDepartment of Pediatrics, Rutgers Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ, USA.
Sathyavageeswaran Shreeram
Kan Tanoue
Sharlyn J Mazur
Ahmed Sayadi
Robert C Robinson
Ettore Appella
Dmitry V Bulavin
National Institutes of Health · USBrunswick (United States) · USState Key Laboratory of Cell Biology

Funding

Regulation and Function of WIP1 Phosphatase and its Role in Tumor CellsZIABC011197 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI APPELLA, ETTORE · 2009 to 2025
$11.5M
6 · The paper itself

Abstract

The Wip1 phosphatase is an oncogene that is overexpressed in a variety of primary human cancers. We were interested in identifying genetic variants that could change Wip1 activity. We identified 3 missense SNPs of the human Wip1 phosphatase, L120F, P322Q, and I496V confer a dominant-negative phenotype. On the other hand, in primary human cancers, PPM1D mutations commonly result in a gain-of-function phenotype, leading us to identify a hot-spot truncating mutation at position 525. Surprisingly, we also found a significant number of loss-of-function mutations of PPM1D in primary human cancers, both in the phosphatase domain and in the C terminus. Thus, PPM1D has evolved to generate genetic variants with lower activity, potentially providing a better fitness for the organism through suppression of multiple diseases. In cancer, however, the situation is more complex, and the presence of both activating and inhibiting mutations requires further investigation to understand their contribution to tumorigenesis.

Indexed as

Evolution, MolecularGenetic VariationModels, MolecularAmino Acid SequenceBlotting, WesternColony-Forming Units AssayDNA DamageFluorescent Antibody TechniqueHumansMolecular Sequence DataMutagenesis, Site-DirectedMutationNeoplasmsPhosphoprotein PhosphatasesProtein Phosphatase 2CPhosphoprotein PhosphatasesPPM1D protein, humanProtein Phosphatase 2CATMChk2genetic variantshuman cancermutationsPPM1DWip1

Identifiers

PMID23907125
PMCPMC3865055
OpenAlexW1998662823

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.