Evidence map›Paper›PMID 23902765›Full record

ArticleThe Journal of biological chemistry2013

RNA binding of T-cell intracellular antigen-1 (TIA-1) C-terminal RNA recognition motif is modified by pH conditions.

Isabel Cruz-Gallardo, Ángeles Aroca, Cecilia Persson, B Göran Karlsson, Irene Díaz-Moreno

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Regulation of TIA-1 Condensates: ZnFrontiers in molecular biosciences · 2022
    Article
  2. Review
  3. AU-rich element-binding proteins in colorectal cancer.World journal of gastrointestinal oncology · 2019
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. RNA recognition and stress granule formation by TIA proteins.International journal of molecular sciences · 2014
    Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Isabel Cruz-GallardoFrom the Instituto de Bioquímica Vegetal y Fotosíntesis (IBVF), Centro de Investigaciones Científicas Isla de la Cartuja (cicCartuja), Universidad de Sevilla-Consejo Superior de Investigaciones Científicas (CSIC), 41092 Seville, Spain and.
Ángeles ArocaFrom the Instituto de Bioquímica Vegetal y Fotosíntesis (IBVF), Centro de Investigaciones Científicas Isla de la Cartuja (cicCartuja), Universidad de Sevilla-Consejo Superior de Investigaciones Científicas (CSIC), 41092 Seville, Spain and.
Cecilia Perssonthe Swedish NMR Centre, University of Gothenburg, SE-40530 Gothenburg, Sweden.
B Göran Karlssonthe Swedish NMR Centre, University of Gothenburg, SE-40530 Gothenburg, Sweden.
Irene Díaz-MorenoFrom the Instituto de Bioquímica Vegetal y Fotosíntesis (IBVF), Centro de Investigaciones Científicas Isla de la Cartuja (cicCartuja), Universidad de Sevilla-Consejo Superior de Investigaciones Científicas (CSIC), 41092 Seville, Spain and. Electronic address: idiazmoreno@us.es.
University of Gothenburg · SECentro de Investigaciones Científicas Isla de la Cartuja · ESConsejo Superior de Investigaciones Científicas · ESUniversidad de Sevilla · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

T-cell intracellular antigen-1 (TIA-1) is a DNA/RNA-binding protein that regulates critical events in cell physiology by the regulation of pre-mRNA splicing and mRNA translation. TIA-1 is composed of three RNA recognition motifs (RRMs) and a glutamine-rich domain and binds to uridine-rich RNA sequences through its C-terminal RRM2 and RRM3 domains. Here, we show that RNA binding mediated by either isolated RRM3 or the RRM23 construct is controlled by slight environmental pH changes due to the protonation/deprotonation of TIA-1 RRM3 histidine residues. The auxiliary role of the C-terminal RRM3 domain in TIA-1 RNA recognition is poorly understood, and this work provides insight into its binding mechanisms.

Indexed as

Amino Acid MotifsHumansHydrogen-Ion ConcentrationPoly(A)-Binding ProteinsProtein BiosynthesisProtein Structure, TertiaryRNA, MessengerRNA SplicingT-Cell Intracellular Antigen-1Poly(A)-Binding ProteinsRNA, MessengerT-Cell Intracellular Antigen-1TIA1 protein, humanCircular Dichroism (CD)FluorescenceNMRProtein/Nucleic Acid InteractionRNA-binding ProteinsRNA Recognition MotifT-cell Intracellular Antigen-1 (TIA-1)

Identifiers

PMID23902765
PMCPMC3764803
OpenAlexW2073273460

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.