Evidence map›Paper›PMID 23901138›Full record

ArticleScience signaling2013

miR-29 acts as a decoy in sarcomas to protect the tumor suppressor A20 mRNA from degradation by HuR.

M Y Balkhi, Mumtaz Y Balkhi, O Hans Iwenofu, Nadine Bakkar, Katherine J Ladner, Dawn S Chandler, Peter J Houghton, Cheryl A London, William Kraybill, Danilo Perrotti and 3 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Science signaling, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 144 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Excess PrPNature communications · 2023
    Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Tumor-Progressive Mechanisms Mediating miRNA-Protein Interaction.International journal of molecular sciences · 2021
    Review
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. A20: a master regulator of arthritis.Arthritis research & therapy · 2020
    Review
  19. The Role of microRNAs in Metabolic Syndrome-Related Oxidative Stress.International journal of molecular sciences · 2020
    Review
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
    Balkhi, Mumtaz Y [corrected to Balkhi, M Y]
5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

M Y BalkhiDepartment of Molecular Virology, Immunology, and Medical Genetics, Human Cancer Genetics Program, The Ohio State University, Columbus, OH 43210, USA.
Mumtaz Y BalkhiDepartment of Molecular Virology, Immunology, and Medical Genetics, Human Cancer Genetics Program, The Ohio State University, Columbus, OH 43210, USA.
O Hans Iwenofu
Nadine Bakkar
Katherine J Ladner
Dawn S Chandler
Peter J Houghton
Cheryl A London
William Kraybill
Danilo Perrotti
Carlo M Croce
Charles Keller
Denis C Guttridge
The Ohio State University · USBarrow Neurological Institute · US

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Tasleem J Padamsee · 1985 to 2026
$132.3M
The Ohio State University Center for Clinical and Translational Science (UL1)UL1TR000090 · NCATS · OHIO STATE UNIVERSITY · PI JACKSON, REBECCA D · 2012 to 2013
$7.9M
Role of RNA-Binding Proteins in BCR/ABL LeukemogenesisR01CA095512 · NCI · OHIO STATE UNIVERSITY · PI PERROTTI, DANILO · 2003 to 2012
$2.2M
MiRNAs/UCRs: biomarkers for cancer risk, tumor detection, progression & treatmentU01CA152758 · NCI · OHIO STATE UNIVERSITY · PI CROCE, CARLO M · 2010 to 2014
$1.8M
Elucidating the role of NF-kB signaling in rhabdomyocarcomaR01CA143082 · NCI · OHIO STATE UNIVERSITY · PI GUTTRIDGE, DENIS C, KELLER, CHARLES · 2011 to 2015
$1.6M
Role of microRNAs in the regulation of CML stem cell survival and self renewalR01CA163800 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI PERROTTI, DANILO · 2012 to 2017
$1.6M
NCATS NIH HHS UL1 TR000090NCI NIH HHS CA R01CA143082NCI NIH HHS P30 CA016058NCI NIH HHS R01 CA095512NCI NIH HHS R01 CA143082NCI NIH HHS R01 CA163800NCI NIH HHS R01CA163800NCI NIH HHS U01 CA152758
6 · The paper itself

Abstract

In sarcoma, the activity of NF-κB (nuclear factor κB) reduces the abundance of the microRNA (miRNA) miR-29. The tumor suppressor A20 [also known as TNFAIP3 (tumor necrosis factor-α-induced protein 3)] inhibits an upstream activator of NF-κB and is often mutated in lymphomas. In a panel of human sarcoma cell lines, we found that the activation of NF-κB was increased and, although the abundance of A20 protein and mRNA was decreased, the gene encoding A20 was rarely mutated. The 3' untranslated region (UTR) of A20 mRNA has conserved binding sites for both of the miRNAs miR-29 and miR-125. Whereas the expression of miR-125 was increased in human sarcoma tissue, that of miR-29 was decreased in most samples. Overexpression of miR-125 decreased the abundance of A20 mRNA, whereas reconstituting miR-29 in sarcoma cell lines increased the abundance of A20 mRNA and protein. By interacting directly with the RNA binding protein HuR (human antigen R; also known as ELAVL1), miR-29 prevented HuR from binding to the A20 3'UTR and recruiting the RNA degradation complex RISC (RNA-induced silencing complex), suggesting that miR-29 can act as a decoy for HuR, thus protecting A20 transcripts. Decreased miR-29 and A20 abundance in sarcomas correlated with increased activity of NF-κB and decreased expression of genes associated with differentiation. Together, the findings reveal a unique role of miR-29 and suggest that its absence may contribute to sarcoma tumorigenesis.

Indexed as

Gene Expression Regulation, Neoplastic3' Untranslated RegionsAnimalsBinding SitesComputational BiologyDNA-Binding ProteinsELAV ProteinsGene SilencingGenes, ReporterHumansImmunoprecipitationInflammationIntracellular Signaling Peptides and ProteinsMiceMicroRNAsMutation3' Untranslated RegionsAGFG1 protein, humanDNA-Binding ProteinsELAV ProteinsIntracellular Signaling Peptides and ProteinsMicroRNAsMIRN29a microRNA, humanNF-kappa BNuclear Pore Complex ProteinsNuclear ProteinsRNA-Binding ProteinsRNA, MessengerTNFAIP3 protein, humanTumor Necrosis Factor alpha-Induced Protein 3

Identifiers

PMID23901138
PMCPMC3885907
OpenAlexW2144522989

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.