Evidence map›Paper›PMID 23901103›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Structures of P-glycoprotein reveal its conformational flexibility and an epitope on the nucleotide-binding domain.

Andrew B Ward, Paul Szewczyk, Vinciane Grimard, Chang-Wook Lee, Lorena Martinez, Rupak Doshi, Alexandra Caya, Mark Villaluz, Els Pardon, Cristina Cregger and 6 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.

0numbers the graph read from it
0cells of the map it votes in
124citing papers in PubMed
15.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

124 citing papers in PubMed, 255 citations in OpenAlex.

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  17. How Cryo-EM Has Expanded Our Understanding of Membrane Transporters.Drug metabolism and disposition: the biological fate of chemicals · 2023
    Review
  18. Article
  19. Article
  20. Article

64 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 4 countries.

Andrew B WardDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Paul Szewczyk
Vinciane Grimard
Chang-Wook Lee
Lorena Martinez
Rupak Doshi
Alexandra Caya
Mark Villaluz
Els Pardon
Cristina Cregger
Douglas J Swartz
Pierre Guy Falson
Ina L Urbatsch
Cedric Govaerts
Jan Steyaert
Geoffrey Chang
Pharmaceutical Biotechnology (Czechia) · CZScripps Research Institute · USTexas Tech University · USUniversité Claude Bernard Lyon 1 · FRUniversité Libre de Bruxelles · BEVIB-VUB Center for Structural Biology · BE

Funding

Structural biology and high resolution studies of P-glycoproteinR01GM094367 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHANG, GEOFFREY A · 2010 to 2013
$1.3M
Structure and function of ABC transporters to understand persistence of global maR01ES021985 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHANG, GEOFFREY A, HAMDOUN, AMRO M · 2012 to 2016
$860k
Understanding polyspecific drug binding in P-glycoproteinR15GM102928 · NIGMS · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI URBATSCH, INA L · 2012 to 2012
$347k
NIEHS NIH HHS R01 ES021985NIGMS NIH HHS R01 GM094367NIGMS NIH HHS R01 GM94367NIGMS NIH HHS R15 GM102928PHS HHS RGM102928
6 · The paper itself

Abstract

P-glycoprotein (P-gp) is one of the best-known mediators of drug efflux-based multidrug resistance in many cancers. This validated therapeutic target is a prototypic, plasma membrane resident ATP-Binding Cassette transporter that pumps xenobiotic compounds out of cells. The large, polyspecific drug-binding pocket of P-gp recognizes a variety of structurally unrelated compounds. The transport of these drugs across the membrane is coincident with changes in the size and shape of this pocket during the course of the transport cycle. Here, we present the crystal structures of three inward-facing conformations of mouse P-gp derived from two different crystal forms. One structure has a nanobody bound to the C-terminal side of the first nucleotide-binding domain. This nanobody strongly inhibits the ATP hydrolysis activity of mouse P-gp by hindering the formation of a dimeric complex between the ATP-binding domains, which is essential for nucleotide hydrolysis. Together, these inward-facing conformational snapshots of P-gp demonstrate a range of flexibility exhibited by this transporter, which is likely an essential feature for the binding and transport of large, diverse substrates. The nanobody-bound structure also reveals a unique epitope on P-gp.

Indexed as

Models, MolecularProtein ConformationAnimalsATP Binding Cassette Transporter, Subfamily B, Member 1Drug Delivery SystemsEpitope MappingMiceSingle-Domain AntibodiesATP Binding Cassette Transporter, Subfamily B, Member 1Single-Domain AntibodiesABC transportermembrane protein structurenanobody-transporter complex

Identifiers

PMID23901103
PMCPMC3746859
OpenAlexW2150246575

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.