Evidence map›Paper›PMID 23897604›Full record

ArticleInfection and immunity2013

Identification of Salmonella enterica serovar Typhimurium genes regulated during biofilm formation on cholesterol gallstone surfaces.

Geoffrey Gonzalez-Escobedo, John S Gunn

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
  2. Article
  3. Naringenin targets FimZ to regulate type I fimbriae and reduce the virulence ofFrontiers in cellular and infection microbiology · 2025
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  5. Biofilm Production and Antibiogram Profiles inIndian journal of microbiology · 2024
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  6. medRxiv : the preprint server for health sciences · 2024
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  7. Frontiers in cellular and infection microbiology · 2024
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  8. Article
  9. Application of a novel lyticFrontiers in microbiology · 2023
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  10. L-Arabinose Transport and Metabolism inFrontiers in cellular and infection microbiology · 2021
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  11. Genetic Determinants ofApplied and environmental microbiology · 2020
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  12. Canadian journal of veterinary research = Revue canadienne de recherche veterinaire · 2020
    Article
  13. Observational
  14. Human Bile-Mediated Regulation ofJournal of bacteriology · 2019
    Article
  15. Article
  16. Everything You Always Wanted to Know AboutFrontiers in microbiology · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Geoffrey Gonzalez-EscobedoCenter for Microbial Interface Biology, Department of Microbial Infection and Immunity, Department of Microbiology, Ohio State University, Columbus, Ohio, USA.
John S Gunn
Interface (United States) · USThe Ohio State University · US

Funding

Bile, Biofilms and Salmonella Gallbladder CarriageR01AI066208 · NIAID · OHIO STATE UNIVERSITY · PI GUNN, JOHN S · 2007 to 2011
$1.8M
NIAID NIH HHS AI066208NIAID NIH HHS R01 AI066208
6 · The paper itself

Abstract

Salmonella spp. are able to form biofilms on abiotic and biotic surfaces. In vivo studies in our laboratory have shown that Salmonella can form biofilms on the surfaces of cholesterol gallstones in the gallbladders of mice and human carriers. Biofilm formation on gallstones has been demonstrated to be a mechanism of persistence. The purpose of this work was to identify and evaluate Salmonella sp. cholesterol-dependent biofilm factors. Differential gene expression analysis between biofilms on glass or cholesterol-coated surfaces and subsequent quantitative real-time PCR (qRT-PCR) revealed that type 1 fimbria structural genes and a gene encoding a putative outer membrane protein (ycfR) were specifically upregulated in Salmonella enterica serovar Typhimurium biofilms grown on cholesterol-coated surfaces. Spatiotemporal expression of ycfR and FimA verified their regulation during biofilm development on cholesterol-coated surfaces. Surprisingly, confocal and scanning electron microscopy demonstrated that a mutant of type 1 fimbria structural genes (ΔfimAICDHF) and a ycfR mutant showed increased biofilm formation on cholesterol-coated surfaces. In vivo experiments using Nramp1(+/+) mice harboring gallstones showed that only the ΔycfR mutant formed extensive biofilms on mouse gallstones at 7 and 21 days postinfection; ΔfimAICDHF was not observed on gallstone surfaces after the 7-day-postinfection time point. These data suggest that in Salmonella spp., wild-type type 1 fimbriae are important for attachment to and/or persistence on gallstones at later points of chronic infection, whereas YcfR may represent a specific potential natural inhibitor of initial biofilm formation on gallstones.

Indexed as

AnimalsBacterial ProteinsBiofilmsCholesterolCloning, MolecularGallstonesGene Expression Regulation, BacterialHumansMiceMutationSalmonella typhimuriumSurface PropertiesBacterial ProteinsCholesterol

Identifiers

PMID23897604
PMCPMC3811749
OpenAlexW2160173760

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.