Evidence map›Paper›PMID 23895281›Full record

ArticleMolecular microbiology2013

The APSES transcription factor Efg1 is a global regulator that controls morphogenesis and biofilm formation in Candida parapsilosis.

Leona A Connolly, Alessandro Riccombeni, Zsuzsana Grózer, Linda M Holland, Denise B Lynch, David R Andes, Attila Gácser, Geraldine Butler

Open access · hybridAbstract read
In one paragraph

Article in Molecular microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
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  4. StudyingPharmaceuticals (Basel, Switzerland) · 2025
    Review
  5. Article
  6. Review
  7. White-opaque switching inMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  8. Genetic modification ofMicrobiology (Reading, England) · 2024
    Article
  9. Article
  10. Article
  11. Caspofungin resistance in Candida albicans: genetic factors and synergistic compounds for combination therapies.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Review
  12. Article
  13. Anti-Molecular therapy. Nucleic acids · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. StuA-Regulated Processes in the DermatophyteFrontiers in cellular and infection microbiology · 2021
    Article
  19. Pathogenesis and Clinical Relevance ofFrontiers in microbiology · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Leona A ConnollySchool of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Belfield, Dublin 4, Ireland.
Alessandro Riccombeni
Zsuzsana Grózer
Linda M Holland
Denise B Lynch
David R Andes
Attila Gácser
Geraldine Butler
University College Dublin · IEUniversity of Szeged · HUUniversity of Wisconsin–Madison · US

Funding

Vesicle-mediated drug resistance of Candida albicans biofilmR01AI073289 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI ANDES, DAVID R, MITCHELL, AARON P · 2008 to 2025
$7.9M
NIAID NIH HHS R01 AI073289
6 · The paper itself

Abstract

Efg1 (a member of the APSES family) is an important regulator of hyphal growth and of the white-to-opaque transition in Candida albicans and very closely related species. We show that in Candida parapsilosis Efg1 is a major regulator of a different morphological switch at the colony level, from a concentric to smooth morphology. The rate of switching is at least 20-fold increased in an efg1 knockout relative to wild type. Efg1 deletion strains also have reduced biofilm formation, attenuated virulence in an insect model, and increased sensitivity to SDS and caspofungin. Biofilm reduction is more dramatic in in vitro than in in vivo models. An Efg1 paralogue (Efh1) is restricted to Candida species, and does not regulate concentric-smooth phenotype switching, biofilm formation or stress response. We used ChIP-seq to identify the Efg1 regulon. A total of 931 promoter regions bound by Efg1 are highly enriched for transcription factors and regulatory proteins. Efg1 also binds to its own promoter, and negatively regulates its expression. Efg1 targets are enriched in binding sites for 93 additional transcription factors, including Ndt80. Our analysis suggests that Efg1 has an ancient role as regulator of development in fungi, and is central to several regulatory networks.

Indexed as

Gene Expression Regulation, FungalAnimalsBiofilmsBiological AssayCandida albicansChromatin ImmunoprecipitationGene Knockout TechniquesGene Regulatory NetworksHyphaeInsectaPromoter Regions, GeneticProtein BindingRegulonSurvival AnalysisTranscription FactorsVirulenceTranscription Factors

Identifiers

PMID23895281
PMCPMC3912905
OpenAlexW1819408513

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.