Evidence map›Paper›PMID 23894430›Full record

ArticlePloS one2013

Nucleotide excision repair is not induced in human embryonic lung fibroblasts treated with environmental pollutants.

Pavel Rossner, Andrea Mrhalkova, Katerina Uhlirova, Milada Spatova, Andrea Rossnerova, Helena Libalova, Jana Schmuczerova, Alena Milcova, Jan Topinka, Radim J Sram

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 13 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Pavel RossnerDepartment of Genetic Ecotoxicology, Institute of Experimental Medicine AS CR, Prague, Czech Republic. prossner@biomed.cas.cz
Andrea Mrhalkova
Katerina Uhlirova
Milada Spatova
Andrea Rossnerova
Helena Libalova
Jana Schmuczerova
Alena Milcova
Jan Topinka
Radim J Sram
Czech Academy of Sciences, Institute of Experimental Medicine · CZCzech Academy of Sciences, Biology Centre · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cellular response to genotoxic treatment depends on the cell line used. Although tumor cell lines are widely used for genotoxicity tests, the interpretation of the results may be potentially hampered by changes in cellular processes caused by malignant transformation. In our study we used normal human embryonic lung fibroblasts (HEL12469 cells) and tested their response to treatment with benzo[a]pyrene (B[a]P) and extractable organic matter (EOM) from ambient air particles <2.5 µm (PM2.5) collected in two Czech cities differing in levels and sources of air pollution. We analyzed multiple endpoints associated with exposure to polycyclic aromatic hydrocarbons (PAHs) including the levels of bulky DNA adducts and the nucleotide excision repair (NER) response [expression of XPE, XPC and XPA genes on the level of mRNA and proteins, unscheduled DNA synthesis (UDS)]. EOMs were collected in the winter and summer of 2011 in two Czech cities with different levels and sources of air pollution. The effects of the studied compounds were analyzed in the presence (+S9) and absence (-S9) of the rat liver microsomal S9 fraction. The levels of bulky DNA adducts were highest after treatment with B[a]P, followed by winter EOMs; their induction by summer EOMs was weak. The induction of both mRNA and protein expression was observed, with the most pronounced effects after treatment with B[a]P (-S9); the response induced by EOMs from both cities and seasons was substantially weaker. The expression of DNA repair genes was not accompanied by the induction of UDS activity. In summary, our results indicate that the tested compounds induced low levels of DNA damage and affected the expression of NER genes; however, nucleotide excision repair was not induced.

Indexed as

DNA RepairAir PollutantsCell LineCell ProliferationDNA AdductsDNA-Binding ProteinsEnvironmental PollutantsFibroblastsGene Expression RegulationHumansLungParticulate MatterPolycyclic Aromatic HydrocarbonsRNA, MessengerXeroderma Pigmentosum Group A ProteinAir PollutantsDNA AdductsDNA-Binding ProteinsEnvironmental PollutantsParticulate MatterPolycyclic Aromatic HydrocarbonsRNA, MessengerXeroderma Pigmentosum Group A ProteinXPA protein, humanXPC protein, human

Identifiers

PMID23894430
PMCPMC3716811
OpenAlexW2075228616

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.