Evidence map›Paper›PMID 23893317›Full record

ArticlePhotosynthesis research2014

The physiological basis for genetic variation in water use efficiency and carbon isotope composition in Arabidopsis thaliana.

Hsien Ming Easlon, Krishna S Nemali, James H Richards, David T Hanson, Thomas E Juenger, John K McKay

Abstract read
In one paragraph

Article in Photosynthesis research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Water use strategies ofFrontiers in plant science · 2023
    Article
  6. Natural variation identifies new effectors of water-use efficiency inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. ContrastingFrontiers in plant science · 2022
    Article
  8. Distinct leaf functional traits ofFrontiers in plant science · 2022
    Article
  9. Article
  10. Article
  11. The carbon isotopic signature of CTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Review
  12. Article
  13. New Insights Into the Evolution of CFrontiers in plant science · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hsien Ming EaslonDepartment of Land, Air & Water Resources, University of California, Davis, CA, 95616, USA, heaslon@ucdavis.edu.
Krishna S Nemali
James H Richards
David T Hanson
Thomas E Juenger
John K McKay

Funding

UNM COBRE: THEORETICAL STUDY OF SPECIFICITY OF RNA SILENCING MECHANISMP20RR018754 · NCRR · UNIVERSITY OF NEW MEXICO · PI LOKER, ERIC SAMUEL · 2003 to 2011
$16.7M
NCRR NIH HHS P20 RR018754NCRR NIH HHS P20RR18754
6 · The paper itself

Abstract

Ecologists and physiologists have documented extensive variation in water use efficiency (WUE) in Arabidopsis thaliana, as well as association of WUE with climatic variation. Here, we demonstrate correlations of whole-plant transpiration efficiency and carbon isotope composition (δ(13)C) among life history classes of A. thaliana. We also use a whole-plant cuvette to examine patterns of co-variation in component traits of WUE and δ(13)C. We find that stomatal conductance (g s) explains more variation in WUE than does A. Overall, there was a strong genetic correlation between A and g s, consistent with selection acting on the ratio of these traits. At a more detailed level, genetic variation in A was due to underlying variation in both maximal rate of carboxylation (V cmax) and maximum electron transport rate (Jmax). We also found strong effects of leaf anatomy, where lines with lower WUE had higher leaf water content (LWC) and specific leaf area (SLA), suggesting a role for mesophyll conductance (g m) in variation of WUE. We hypothesize that this is due to an effect through g m, and test this hypothesis using the abi4 mutant. We show that mutants of ABI4 have higher SLA, LWC, and g m than wild-type, consistent with variation in leaf anatomy causing variation in g m and δ(13)C. These functional data also add further support to the central, integrative role of ABI4 in simultaneously altering ABA sensitivity, sugar signaling, and CO2 assimilation. Together our results highlight the need for a more holistic approach in functional studies, both for more accurate annotation of gene function and to understand co-limitations to plant growth and productivity.

Indexed as

Genetic VariationAbscisic AcidArabidopsisArabidopsis ProteinsCarbon DioxideCarbon IsotopesElectron TransportMesophyll CellsMutationPlant LeavesPlant StomataPlant TranspirationTranscription FactorsWaterABI4 protein, ArabidopsisAbscisic AcidArabidopsis ProteinsCarbon DioxideCarbon IsotopesTranscription FactorsWater

Identifiers

PMID23893317
PMCPMC3889294

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.