Evidence map›Paper›PMID 23891776›Full record

ArticleGenomics, proteomics & bioinformatics2013

Exploring the nicotinic acetylcholine receptor-associated proteome with iTRAQ and transgenic mice.

Tristan D McClure-Begley, Kathy L Stone, Michael J Marks, Sharon R Grady, Christopher M Colangelo, Jon M Lindstrom, Marina R Picciotto

Open access · goldAbstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Molecular organization of central cholinergic synapses.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Article
  4. Effects of nicotine on DARPP-32 and CaMKII signaling relevant to addiction.Advances in pharmacology (San Diego, Calif.) · 2021
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Tristan D McClure-BegleyDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT 06508, USA.
Kathy L Stone
Michael J Marks
Sharon R Grady
Christopher M Colangelo
Jon M Lindstrom
Marina R Picciotto
Yale University · USUniversity of Colorado Boulder · USUniversity of Pennsylvania · US

Funding

YALE UNIVERSITY CLINICAL AND TRANSLATIONAL SCIENCE AWARD PROGRAMUL1RR024139 · NCRR · YALE UNIVERSITY · PI SHERWIN, ROBERT S · 2006 to 2011
$56.8M
Yale/NIDA Neuroproteomics Research CenterP30DA018343 · NIDA · YALE UNIVERSITY · PI Marina R Picciotto · 2004 to 2026
$37.1M
RESEARCH TRAINING - BIOLOGICAL SCIENCEST32MH014276 · NIMH · YALE UNIVERSITY · PI Marina R Picciotto · 1985 to 2026
$7.2M
Cholinergic Contribution to Circuits Underlying DepressionR01MH077681 · NIMH · YALE UNIVERSITY · PI MINEUR, YANN SEBASTIEN, PICCIOTTO, MARINA R · 2006 to 2025
$7.0M
Yale SCOR on Gender-Sensitive Treatment for Tobacco DependenceP50DA033945 · NIDA · YALE UNIVERSITY · PI MCKEE, SHERRY ANN · 2012 to 2017
$6.5M
GENETICS OF NICOTINE TOLERANCE: ROLE OF RECEPTORSR01DA003194 · NIDA · UNIVERSITY OF COLORADO AT BOULDER · PI MARKS, MICHAEL J · 1985 to 2013
$5.5M
Anatomical basis for nicotine addiction in miceR01DA014241 · NIDA · YALE UNIVERSITY · PI PICCIOTTO, MARINA R · 2001 to 2018
$5.2M
STUDIES USING PURIFIED ACETYLCHOLINE RECEPTORSR01NS011323 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI LINDSTROM, JON MARTIN · 1985 to 2012
$5.0M
Studies with Nicotinic Null Mutant MiceP30DA015663 · NIDA · UNIVERSITY OF COLORADO AT BOULDER · PI MARKS, MICHAEL J · 2003 to 2013
$4.5M
Anatomical Basis for Nicotine AddictionR37DA014241 · NIDA · YALE UNIVERSITY · PI Marina R Picciotto · 2020 to 2026
$2.7M
5500 QTrap Mass Spectrometer for Yale University, Keck LaboratoryS10RR026707 · NCRR · YALE UNIVERSITY · PI COLANGELO, CHRISTOPHER MICHAEL · 2010 to 2010
$492k
NCRR NIH HHS S10 RR026707NCRR NIH HHS UL1 RR024139NIDA NIH HHS DA003194NIDA NIH HHS DA015663NIDA NIH HHS DA018343NIDA NIH HHS DA14241NIDA NIH HHS P30 DA015663NIDA NIH HHS P30 DA018343NIDA NIH HHS P50 DA033945NIDA NIH HHS R01 DA003194NIDA NIH HHS R01 DA014241NIDA NIH HHS R37 DA014241NIMH NIH HHS R01 MH077681NIMH NIH HHS T32 MH014276NINDS NIH HHS NS11323NINDS NIH HHS R01 NS011323
6 · The paper itself

Abstract

Neuronal nicotinic acetylcholine receptors (nAChRs) containing α4 and β2 subunits are the principal receptors in the mammalian central nervous system that bind nicotine with high affinity. These nAChRs are involved in nicotine dependence, mood disorders, neurodegeneration and neuroprotection. However, our understanding of the interactions between α4β2-containing (α4β2(∗)) nAChRs and other proteins remains limited. In this study, we identified proteins that interact with α4β2(∗) nAChRs in a genedose dependent pattern by immunopurifying β2(∗) nAChRs from mice that differ in α4 and β2 subunit expression and performing proteomic analysis using isobaric tags for relative and absolute quantitation (iTRAQ). Reduced expression of either the α4 or the β2 subunit results in a correlated decline in the expression of a number of putative interacting proteins. We identified 208 proteins co-immunoprecipitated with these nAChRs. Furthermore, stratified linear regression analysis indicated that levels of 17 proteins was correlated significantly with expression of α4β2 nAChRs, including proteins involved in cytoskeletal rearrangement and calcium signaling. These findings represent the first application of quantitative proteomics to produce a β2(∗) nAChR interactome and describe a novel technique used to discover potential targets for pharmacological manipulation of α4β2 nAChRs and their downstream signaling mechanisms.

Indexed as

AnimalsBrainChromatography, LiquidMiceMice, Inbred C57BLMice, TransgenicNicotineProtein BindingProteomeProteomicsReceptors, NicotinicTandem Mass SpectrometryNicotinenicotinic receptor alpha4beta2ProteomeReceptors, NicotinicAffinity purificationNicotinic receptorQuantitative proteomicsTransgenic mouse

Identifiers

PMID23891776
PMCPMC3806329
OpenAlexW1977571972

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.