Evidence map›Paper›PMID 23891751›Full record

ArticleBiochemical and biophysical research communications2013

Inhibition of GATE-16 attenuates ATRA-induced neutrophil differentiation of APL cells and interferes with autophagosome formation.

Daniel Brigger, Bruce E Torbett, Joy Chen, Martin F Fey, Mario P Tschan

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Unlocking the gate to GABARAPL2.Biologia futura · 2022
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Autophagy-Regulating microRNAs and Cancer.Frontiers in oncology · 2017
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Daniel BriggerDivision of Experimental Pathology, Institute of Pathology, University of Bern, Bern, Switzerland.
Bruce E Torbett
Joy Chen
Martin F Fey
Mario P Tschan
Scripps Research Institute · USUniversity Hospital of Bern · CHUniversity of Bern · CH

Funding

BLOOD SYSTEMS IN COAGULATION AND VESSEL DISEASET32HL007195 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI RUF, WOLFRAM · 1985 to 2011
$5.1M
Anti-HIV Gene Delivery to Human Hematopoietic CellsR01HL091219 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI TORBETT, BRUCE EDWARD · 2007 to 2010
$1.6M
NHLBI NIH HHS R01 HL091219NHLBI NIH HHS R01HL091219NHLBI NIH HHS T32 HL007195
6 · The paper itself

Abstract

Autophagy is an intracellular bulk degradation process involved in cell survival upon stress induction, but also with a newly identified function in myeloid differentiation. The autophagy-related (ATG)8 protein family, including the GABARAP and LC3 subfamilies, is crucial for autophagosome biogenesis. In order to evaluate the significance of the GABARAPs in the pathogenesis of acute myeloid leukemia (AML), we compared their expression in primary AML patient samples, CD34(+) progenitor cells and in granulocytes from healthy donors. GABARAPL1 and GABARAPL2/GATE-16, but not GABARAP, were significantly downregulated in particular AML subtypes compared to normal granulocytes. Moreover, the expression of GABARAPL1 and GATE-16 was significantly induced during ATRA-induced neutrophil differentiation of acute promyelocytic leukemia cells (APL). Lastly, knocking down GABARAPL2/GATE-16 in APL cells attenuated neutrophil differentiation and decreased autophagic flux. In conclusion, low GABARAPL2/GATE-16 expression is associated with an immature myeloid leukemic phenotype and these proteins are necessary for neutrophil differentiation of APL cells.

Indexed as

AutophagyGene Expression Regulation, LeukemicAdaptor Proteins, Signal TransducingAdolescentAdultAgedAntigens, CD34Apoptosis Regulatory ProteinsAutophagy-Related Protein 8 FamilyCell DifferentiationCell LineFemaleHumansLeukemia, Promyelocytic, AcuteMaleMicrofilament ProteinsAdaptor Proteins, Signal TransducingAntigens, CD34Apoptosis Regulatory ProteinsAutophagy-Related Protein 8 FamilyGABARAPL1 protein, humanGABARAPL2 protein, humanGABARAP protein, humanMicrofilament ProteinsMicrotubule-Associated ProteinsTretinoinAMLAPLGABARAPGABARAPL1GATE-16Neutrophil differentiation

Identifiers

PMID23891751
PMCPMC4225710
OpenAlexW2087737571

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.