Evidence map›Paper›PMID 23889931›Full record

ArticleNeuron2013

Optogenetic inhibition of synaptic release with chromophore-assisted light inactivation (CALI).

John Y Lin, Sharon B Sann, Keming Zhou, Sadegh Nabavi, Christophe D Proulx, Roberto Malinow, Yishi Jin, Roger Y Tsien

Open access · bronzeAbstract read
In one paragraph

Article in Neuron, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed, 1 pooled it
8.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 1 synthesis or guideline pooled it, 182 citations in OpenAlex.

  1. Effects of Light on Attention and Reaction Time: A Systematic Review.Journal of research in health sciences · 2021
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Optogenetics at the presynapse.Nature neuroscience · 2022
    Review
  17. Article
  18. A Photosensitized Singlet Oxygen (Molecules (Basel, Switzerland) · 2022
    Review
  19. Article
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

John Y LinDepartment of Pharmacology, University of California, San Diego, La Jolla, CA 92093-0647, USA. j8lin@ucsd.edu
Sharon B Sann
Keming Zhou
Sadegh Nabavi
Christophe D Proulx
Roberto Malinow
Yishi Jin
Roger Y Tsien
University of California San Diego · USHoward Hughes Medical Institute · US

Funding

DYNAMICS OF SIGNAL TRANSDUCTION IN NEURONSR01NS027177 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADAMS, STEPHEN ROY, ELLISMAN, MARK H · 1989 to 2017
$5.8M
GABAERGIC NEURON DIFFERENTIATION IN C ELEGANSR01NS035546 · NINDS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI JIN, YISHI · 1996 to 2016
$5.3M
DYNAMICS OF SIGNAL TRANSDUCTION IN NEURONSR37NS027177 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TSIEN, ROGER Y · 2007 to 2013
$4.8M
MECHANISMS OF SYNAPTIC LTP--SILENT SYNAPSESR01MH049159 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MALINOW, ROBERTO · 1997 to 2019
$4.7M
A Synaptic Locus Controlling Behavioral DepressionR01MH091119 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MALINOW, ROBERTO · 2011 to 2020
$3.9M
GABAergic Neuron Differentiation in C.elegansR37NS035546 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JIN, YISHI · 2017 to 2021
$2.4M
Role of Rab-5 regulators in neuronal developmentF32NS067891 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SANN, SHARON B · 2010 to 2012
$153k
Howard Hughes Medical InstituteNIMH NIH HHS MH091119NIMH NIH HHS R01 MH049159NIMH NIH HHS R01 MH091119NINDS NIH HHS F32 NS067891NINDS NIH HHS NS027177NINDS NIH HHS NS035546NINDS NIH HHS NS067891NINDS NIH HHS R01 NS027177NINDS NIH HHS R01 NS035546NINDS NIH HHS R37 NS027177NINDS NIH HHS R37 NS035546
6 · The paper itself

Abstract

Optogenetic techniques provide effective ways of manipulating the functions of selected neurons with light. In the current study, we engineered an optogenetic technique that directly inhibits neurotransmitter release. We used a genetically encoded singlet oxygen generator, miniSOG, to conduct chromophore assisted light inactivation (CALI) of synaptic proteins. Fusions of miniSOG to VAMP2 and synaptophysin enabled disruption of presynaptic vesicular release upon illumination with blue light. In cultured neurons and hippocampal organotypic slices, synaptic release was reduced up to 100%. Such inhibition lasted >1 hr and had minimal effects on membrane electrical properties. When miniSOG-VAMP2 was expressed panneuronally in Caenorhabditis elegans, movement of the worms was reduced after illumination, and paralysis was often observed. The movement of the worms recovered overnight. We name this technique Inhibition of Synapses with CALI (InSynC). InSynC is a powerful way to silence genetically specified synapses with light in a spatially and temporally precise manner.

Indexed as

AnimalsAnimals, NewbornCaenorhabditis elegansCells, CulturedChromophore-Assisted Light InactivationHippocampusNeural InhibitionOptogeneticsOrgan Culture TechniquesRatsRats, Sprague-DawleySynapsesSynaptic Transmission

Identifiers

PMID23889931
PMCPMC3804158
OpenAlexW1991901212

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.