Evidence map›Paper›PMID 23889843›Full record

ArticleGenome biology2013

Gene expression changes with age in skin, adipose tissue, blood and brain.

Daniel Glass, Ana Viñuela, Matthew N Davies, Adaikalavan Ramasamy, Leopold Parts, David Knowles, Andrew A Brown, Asa K Hedman, Kerrin S Small, Alfonso Buil and 14 more

Open access · goldAbstract readTwin Study
In one paragraph

Article in Genome biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 173 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
173citing papers in PubMed, 4 pooled it
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

173 citing papers in PubMed, 4 syntheses or guidelines pooled it, 315 citations in OpenAlex.

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113 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 7 institutions in 3 countries.

Daniel Glass
Ana Viñuela
Matthew N Davies
Adaikalavan Ramasamy
Leopold Parts
David Knowles
Andrew A Brown
Asa K Hedman
Kerrin S Small
Alfonso Buil
Elin Grundberg
Alexandra C Nica
Paola Di Meglio
Frank O Nestle
Mina Ryten
UK Brain Expression consortium
MuTHER consortium
Richard Durbin
Mark I McCarthy
Panagiotis Deloukas
Emmanouil T Dermitzakis
Michael E Weale
Veronique Bataille
Tim D Spector
King's College London · GBWellcome Sanger Institute · GBGuy's Hospital · GBUniversity of Geneva · CHCentre for Human Genetics · GBLondon North West Healthcare NHS Trust · GBStanford University · US

Funding

Methods for high-resolution analysis of genetic effects on gene expressionR01MH090941 · NIMH · UNIVERSITY OF GENEVA · PI DERMITZAKIS, EMMANOUIL, GUIGO, RODERIC · 2010 to 2012
$863k
Department of HealthMedical Research Council G0802462Medical Research Council MR/J006742/1Medical Research Council MR/K01417X/1NIMH NIH HHS R01 MH090941Wellcome Trust 081917Wellcome Trust 090532Wellcome Trust 095515Wellcome Trust WT098051
6 · The paper itself

Abstract

backgroundPrevious studies have demonstrated that gene expression levels change with age. These changes are hypothesized to influence the aging rate of an individual. We analyzed gene expression changes with age in abdominal skin, subcutaneous adipose tissue and lymphoblastoid cell lines in 856 female twins in the age range of 39-85 years. Additionally, we investigated genotypic variants involved in genotype-by-age interactions to understand how the genomic regulation of gene expression alters with age.

resultsUsing a linear mixed model, differential expression with age was identified in 1,672 genes in skin and 188 genes in adipose tissue. Only two genes expressed in lymphoblastoid cell lines showed significant changes with age. Genes significantly regulated by age were compared with expression profiles in 10 brain regions from 100 postmortem brains aged 16 to 83 years. We identified only one age-related gene common to the three tissues. There were 12 genes that showed differential expression with age in both skin and brain tissue and three common to adipose and brain tissues.

conclusionsSkin showed the most age-related gene expression changes of all the tissues investigated, with many of the genes being previously implicated in fatty acid metabolism, mitochondrial activity, cancer and splicing. A significant proportion of age-related changes in gene expression appear to be tissue-specific with only a few genes sharing an age effect in expression across tissues. More research is needed to improve our understanding of the genetic influences on aging and the relationship with age-related diseases.

Indexed as

Gene Expression Regulation, DevelopmentalAdipose TissueAdultAgedAged, 80 and overAge DistributionAgingBrainCell LineDatabases, GeneticFemaleGenome-Wide Association StudyGenotypeHumansMiddle AgedPolymorphism, Single Nucleotide

Identifiers

PMID23889843
PMCPMC4054017
OpenAlexW1986348806

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.